Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4 131 1e-25 seq1 129 5e-25 seq11 84.2 2e-11 >seq4 Length=1918071 Score = 131 bits (144), Expect = 1e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||||||| |||||||||||||||||||||||| || ||| | || || Sbjct 1157703 ACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCATCTTCG 1157762 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||||||||| || | ||||| |||||||| || | ||||||||||||| Sbjct 1157763 AGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGG 1157822 Query 45248 ATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| | || | || | |||| | ||| ||||| | || || ||||| Sbjct 1157823 ATCTTCGCCTTCA-CGTTGTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCTT 1157881 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||| || ||||| |||||| Sbjct 1157882 TCCGGTGAGGGTCTTGACGAAGATCTGCATG 1157912 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| || ||| | || |||| || |||||||| || Sbjct 1158227 CTCCTTCTGGATGTTGTAGTCGGACAACGTGCGCCCATCTTCCAACTGCTTTCCGGCAAA 1158286 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | |||||||| |||||||| | |||||||||||| || ||| |||||| Sbjct 1158287 GATGAGACGCTGTTGATCGGGAGGGATACCCTCCTTGTCTTGGATCTTTGCCTTAACGTT 1158346 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| ||| ||||| | ||| || |||||||| || || ||||| || Sbjct 1158347 GTCGATGGTGTCGGACGACTCTACCTCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGAC 1158406 Query 45325 AAAGATTTGCAT 45336 ||||||||||| Sbjct 1158407 GAAGATTTGCAT 1158418 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||||||||||||||| || || | || || || || || || ||||| Sbjct 1158455 CTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAA 1158514 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||| || || |||||||| || | |||||||||||| ||| || ||| || Sbjct 1158515 GATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 1158574 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| ||| || || | || || |||||||| |||| |||||||| Sbjct 1158575 GTCGATGGTGTCGGAGGACTCGACTTCGAGCGTGATAGTCTTGCCAGTCAAGGTCTTCAC 1158634 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 1158635 AAAGATCTGCAT 1158646 >seq1 Length=3319996 Score = 129 bits (142), Expect = 5e-25 Identities = 156/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 45127 TACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGT 45185 ||||||| |||||||||||||||||||| ||||| |||||| || ||| | || | Sbjct 2718540 TACCAAGATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCT 2718599 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 | || || || || ||||| || | ||||| |||||||| || | ||||||||| ||| Sbjct 2718600 CGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCCT 2718659 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 ||| || ||| || | | | ||||| | ||||||||||| ||| || |||| Sbjct 2718660 GAATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCT 2718719 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || || ||||| || ||||| ||||| Sbjct 2718720 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2718750 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||| ||| || ||| |||| || ||||| || ||||| || Sbjct 2719065 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAA 2719124 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| |||||||| || | |||||||||||| || ||| ||| || Sbjct 2719125 GATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACGTT 2719184 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | ||||| | ||| || || | || |||||||||||||| || ||||| || Sbjct 2719185 GTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTGAC 2719244 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 2719245 GAAGATCTGCAT 2719256 >seq11 Length=1123092 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||||||| | || ||| |||| || Sbjct 313829 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGGCCGTCCTCG 313770 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || || || |||||||| ||||| ||||| ||||| || || Sbjct 313769 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGG 313729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395072753990668