Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 178 1e-39 seq8 134 1e-26 seq4 107 2e-18 seq1 93.3 4e-14 >seq5 Length=1807594 Score = 178 bits (196), Expect = 1e-39 Identities = 299/433 (69%), Gaps = 0/433 (0%) Strand=Plus/Minus Query 57694 TGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCAC 57753 |||| || |||||||| ||||| || || || ||||||||| | |||||| | || || Sbjct 1323670 TGGCCTTCTTCGCCGCCTCCGACGGGATAGTCAACGAGAATCTCGTCGAACGCTTCTCTA 1323611 Query 57754 AAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACG 57813 | || || |||| | || || | || |||||||| || ||| | || ||||| | Sbjct 1323610 ACGAGGTTCAAGCCGCAGAAGCCCGCTGTTTTTACGGCTTCCAAATCATGATGGAAAATG 1323551 Query 57814 TGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAAC 57873 | ||||| |||| ||| || || || || ||||| || | || |||| | | ||| Sbjct 1323550 TCCATTCGGAAACGTACTCACTCCTGATTGATACATATATCAAAGACACCCAAGAGCGGG 1323491 Query 57874 GTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAA 57933 | |||||||| || ||||| || |||| ||| ||||| ||||| ||| | Sbjct 1323490 ACCGCCTGTTCAATGCCATCGACACCGTGCCGTGCATCAAAAAGAAAGCAGATTGGGCCC 1323431 Query 57934 TCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCG 57993 || ||||| | | || | ||||||||| | || | ||||| || || Sbjct 1323430 TCCGCTGGATCTCTGACAAAAGATCCTCCTTCGCCGAGCGCCTGGTGGCGTTTGCGTGCG 1323371 Query 57994 TCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCC 58053 ||||||| |||||||| || || ||| || |||||||| ||| |||||||||||||| Sbjct 1323370 TCGAAGGCATATTCTTCTCCGGGTCCTTCGCCGCAATATTCTGGCTGAAGAAACGCGGCT 1323311 Query 58054 TGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTG 58113 | ||||| |||||||| ||| ||||| |||| || ||||| || | || || | Sbjct 1323310 TAATGCCAGGCCTGACCTTTTCAAACGAACTGATCAGTCGAGACGAAGGAATGCACACGG 1323251 Query 58114 ATTTTGCGTGCCT 58126 | ||||| ||||| Sbjct 1323250 ACTTTGCCTGCCT 1323238 Score = 156 bits (172), Expect = 4e-33 Identities = 385/580 (66%), Gaps = 17/580 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || || || ||||||| || || | ||||| Sbjct 1325111 ATCTGGCAAATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCGGAGGAGATGGACCTC 1325170 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | | | |||| || |||| | | || | Sbjct 1325171 TCCAAGGATCTCCACGACTGGAACACGCGTCTCAACGACAATGAGCGCCACTTCGTCTCC 1325230 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 || || | || || ||||| || ||||| ||||| || |||||||| | ||||| | Sbjct 1325231 CATGTCCTTGCCTTCTTCGCAGCCTCCGACGGTATCGTCAACGAGAACCTCGTCGAGCGT 1325290 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | ||||| || | | ||||| | ||||| || || || ||| | || Sbjct 1325291 TTCTCTAACGAAGTTCAGGCCGCCGAGGCTCGCTGCTTCTATGGCTTCCAAATTATGATG 1325350 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | || || || |||||||| |||||| | || ||| | | Sbjct 1325351 GAGAACATCCACTCTGAGACATACTCCCTCCTCATCGACACGTACATCAAAGACCCCAA- 1325409 Query 57867 GAGAAACGT-AGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | |||| || || ||| ||||| |||| || || || ||| |||||||| Sbjct 1325410 --GCAACGGGAGCACCTCTTCGACGCGGTCGAGACCATCCCTTGCATCAAGAAGAAGGCT 1325467 Query 57924 GAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||| | || ||||| | ||| | | | ||||||| || | || | Sbjct 1325468 GACTGGGCCCTCCGGTGGATCTCCGACAAG----AAGTCTTCGTTCGCTGAACGTCTTGT 1325523 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 ||| ||||| |||||||| ||||| ||||| || ||| ||| ||| | || || ||| | Sbjct 1325524 CGCCTTCGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTCTGGCT 1325583 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||| || || || ||||| || || || || ||||||||||| || ||||| Sbjct 1325584 CAAGAAGCGTGGACTCATGCCTGGTCTCACCTTCTCGAACGAGTTGATCAGCCGTGACGA 1325643 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139 ||| | || || || || || ||||| | | ||| ||| Sbjct 1325644 GGGCATGCACACCGACTTCGCCTGCCTGCTCTTCTCCCAC 1325683 >seq8 Length=1462401 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || ||||| || ||||| ||||||||||||| ||||| ||||| || ||||| |||||| Sbjct 1395481 AAGAGATCAGGGATCCAGAGAGCGTAGAACAAATCGCGCGCGCGAACTTCCTCCTTGCCG 1395422 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 ||| || |||||| | || || | | || |||||||| ||||||| || | | Sbjct 1395421 TGGTTTTTGCGCAAATCAATGAACTCGTAGATATCGGCATGCCATGGCTCGATATAGATG 1395362 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 || || ||||| || | ||| |||||||| |||||||||||||| || || | ||| Sbjct 1395361 GCGAAAGCGCCAGGACGCTTGTTGCCGCCTTGATCGACGTAACGAGCAGTCGCATCGTAT 1395302 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| ||||| || |||| ||||| || Sbjct 1395301 GCTCGAAGCATAGGAACGATGCCGTTCGA 1395273 Score = 93.3 bits (102), Expect = 4e-14 Identities = 189/278 (68%), Gaps = 7/278 (3%) Strand=Plus/Minus Query 22504 TGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCAT 22563 |||| | |||||||| | || ||| ||||| ||||| || || || || ||||| Sbjct 1396443 TGTGTAGGGTTCGAAGCACTCGTTGAAGCCCAGGATCTGGCTCGTTGACGCAGTGGGCAT 1396384 Query 22564 CGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAG--CATC 22621 ||||| | || | ||||| | | || ||| | || || ||||||| |||| Sbjct 1396383 GGGCGCAAGAAGCAAGGAGTTACGGAGACCAGTCTTGGCCATCTTCTTCTTGAGTCCATC 1396324 Query 22622 GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCG 22681 |||||||||||||| || || || ||||| ||| | ||| | |||| |||| Sbjct 1396323 --CCAGTCCCACAGATTGGTAGGTGTGACATT---CCAGAGATCAAACTGCAGATCGCCT 1396269 Query 22682 CGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAG 22741 | ||||| ||||| |||| ||| || || ||||| || | || |||| | || || Sbjct 1396268 CTGCTCGCAGGGCTTCCTTGGTATGTCTCATACGGTCCCTCCTTCTCGGCCATCTCACAA 1396209 Query 22742 CTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGAT 22779 || ||||| | || ||| || || ||||||||||| Sbjct 1396208 CTGGCCTCGACGGCCGCGTGGTAGATCGTCTCGAAGAT 1396171 >seq4 Length=1918071 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || |||||| | || || || ||||| Sbjct 1158418 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAGACCATCACCCTTGAGGTAGAGTCGTCC 1158359 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | || ||| | |||||||| || | || ||||| || Sbjct 1158358 GACACCATCGACAACGTTAAGGCAAAGA-TCCAAGACAAGGAGGGTATCCCTCCCGATCA 1158300 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || || || || || ||||||||||| || || ||| || || Sbjct 1158299 ACAGCGTCTCATCTTTGCCGGAAAGCAGTTGGAAGATGGGCGCACGTTGTCCGACTACAA 1158240 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || |||||||| ||||| || || Sbjct 1158239 CATCCAGAAGGAGTCGACTCTCCATCTTGTTCT 1158207 Score = 105 bits (116), Expect = 6e-18 Identities = 153/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || ||||||||| | || || ||| ||||| Sbjct 1158190 ATGCAGATCTTCGTCAAGACGTTGACGGGAAAGACGATCACCCTTGAGGTCGAATCGTCC 1158131 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || |||||||||||| | || || || ||| Sbjct 1158130 GACACGATCGACAACGTAAAGGCGAAGATTCAAGACAAGGAAGGCATTCCCCCGGATCAG 1158071 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| | || ||| || || ||||| ||| Sbjct 1158070 CAGCGTCTTATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGTCGGATTACAAC 1158011 Query 31373 ATTCAAAAAGAATCGACTCTTCATC-TGGTACTTA 31406 || || || || || || || |||| |||||| || Sbjct 1158010 ATCCAGAAGGAGTCAACCCTCCATCTTGGTACGTA 1157976 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| ||||| || ||||| |||| || || | ||| Sbjct 1158646 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCC 1158587 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| ||| | || ||||||||| Sbjct 1158586 GACACCATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1158527 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||||||||| ||| | || || || | || || ||| Sbjct 1158526 CAACGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCTGACTACAAC 1158467 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || ||||||||||| || || || | || | ||||||| Sbjct 1158466 ATTCAGAAGGAGTCGACTCTTCACCTCGTCCTCCGTCTTCGTGGCGGTA 1158418 >seq1 Length=3319996 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| |||||||| |||| || || | || Sbjct 2719256 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACGATCACTCTCGAAGTCGAGTCTTCG 2719197 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| | ||||||||| ||| | || |||||||| Sbjct 2719196 GACACGATCGACAACGTGAAGGCAAAGA-TCCAGGACAAGGAGGGCATTCCCCCCGACCA 2719138 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || || ||||| || | || ||| || | |||||| || Sbjct 2719137 GCAGCGCCTTATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGATTACAA 2719078 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || |||||||| || || || Sbjct 2719077 CATCCAGAAGGAGTCTACTCTTCACCTTGTCCT 2719045 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| | || || || | || Sbjct 2718750 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGTCTTCG 2718691 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||| ||||| || | || ||||||||| Sbjct 2718690 GACACCATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAGGGTATCCCACCCGACCAG 2718631 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || ||||| ||||| ||| | || || Sbjct 2718630 CAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAGGA 2718596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763569383360