Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq8 102 2e-16 seq5 86.0 1e-11 >seq8 Length=1462401 Score = 102 bits (112), Expect = 2e-16 Identities = 182/263 (69%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838 || || ||| | || |||||||||||| ||| || || | ||| |||||||| || Sbjct 1395170 GTTGAGGCCAATGCCGCCAGCAGTCTTGCTGATCATGGCACAGTTCTTGAGAGTATCGTA 1395111 Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGT 94898 ||||| || ||| ||||| | | | | ||||||||| ||| || || || | Sbjct 1395110 GATACCTTCGATGGAGTCATCCTTCATACATACAAGGAAGCATGAGCTGAGCTGAGGA-T 1395052 Query 94899 GAC-TGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGA 94957 || |||||| || || || ||||| || || ||||| || ||| | ||||| | Sbjct 1395051 GAGGTGTTCCGGCGTTGAAGAGGGTGGGTGACGCGTGGGTGAAGTAGCGTTGGGACATAA 1394992 Query 94958 GATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCA 95017 | | || ||||| ||| | | ||| || ||||||||||||||||||||||||| Sbjct 1394991 GTTGGTAGGTTTCGATGGCCCGGTCGATATCGTTACCGTGAATGCCGACAGCCACACGCA 1394932 Query 95018 TAATCATGTCCTGAGGGCGCTCA 95040 | | ||||| ||| || || ||| Sbjct 1394931 TCAACATGTGCTGGGGTCGTTCA 1394909 >seq5 Length=1807594 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 101903 TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC 101962 || || |||| |||| ||||| ||||| || || || || ||||| ||| | ||| Sbjct 1325507 TTCGCTGAACGTCTTGTCGCCTTCGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCCTTC 1325566 Query 101963 GCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022 || ||||| |||||| ||||||| | || | ||||||||||||||| ||| || ||| Sbjct 1325567 GCGTCCATCTTCTGGCTCAAGAAGCGTGGACTCATGCCTGGTCTCACCTTCTCGAACGAG 1325626 Query 102023 TTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || || | ||||| || | || |||||| || ||| |||| || Sbjct 1325627 TTGATCAGCCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTCTT 1325676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577559045140