Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq5 138 1e-27 >seq5 Length=1807594 Score = 138 bits (152), Expect = 1e-27 Identities = 241/348 (69%), Gaps = 2/348 (1%) Strand=Plus/Plus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 || || |||| ||| || |||||||||||||| || | |||||||| || || ||||| Sbjct 1323262 CCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTCAGGCCTGGCATTAAGCCGCGTTTC 1323321 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCA-GCAAA 13799 || | ||| |||||||| ||||| || ||||| |||||||| || || || ||| ||||| Sbjct 1323322 TTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAGAATATGCCTTCGAC-GCACGCAAA 1323380 Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859 ||| | || || || | || || | | |||||| || ||||| ||||| || Sbjct 1323381 CGCCACCAGGCGCTCGGCGAAGGAGGATCTTTTGTCAGAGATCCAGCGGAGGGCCCAATC 1323440 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTT 13919 | ||| ||||| || | || || ||||| |||||||| | | ||| ||||| Sbjct 1323441 TGCTTTCTTTTTGATGCACGGCACGGTGTCGATGGCATTGAACAGGCGGTCCCGCTCTTG 1323500 Query 13920 AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTAT 13979 || | || ||||||||||| || | ||| |||| || || | ||||| || Sbjct 1323501 GGTGTCTTTGATATATGTATCAATCAGGAGTGAGTACGTTTCCGAATGGACATTTTCCAT 1323560 Query 13980 AGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14027 || || || || |||||||| | ||||||| ||| ||||| Sbjct 1323561 CATGATTTGGAAGCCGTAAAAACAGCGGGCTTCTGCGGCTTGAACCTC 1323608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478585760961120