Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 5e-12 >seq4 Length=1918071 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | || | ||||| ||| |||||| || | ||||| |||||| Sbjct 1158192 CCACCACGGAGACGGAGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1158251 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || || | || ||||| || || |||||||| || | ||||||||||||| || Sbjct 1158252 AACGTGCGCCCATCTTCCAACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGGAGGG 1158311 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||| || || || |||| | || || || | | |||||| | ||| || Sbjct 1158312 ATACCCTCCTTGTCTTGGATCTTTGCCTTAACGTTGTCGATGGTGTCGGACGACTCTACC 1158371 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || ||||| || || || || || |||||||| Sbjct 1158372 TCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 1158418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367238845464