Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq5 239 7e-58 >seq5 Length=1807594 Score = 239 bits (264), Expect = 7e-58 Identities = 395/561 (70%), Gaps = 12/561 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| |||||| ||||||| || ||||| | || ||| | || || Sbjct 1325111 ATCTGGCAAATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCGGAGGAGATGGACCTC 1325170 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | || ||| | | || | |||||| | || | || Sbjct 1325171 TCCAAGGATCTCCACGACTGGAACACGCGTCTCAACGACAATGAGCGCCACTTCGTCTCC 1325230 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 || | | |||||||| || | |||||| || ||||||||||| || || || || || Sbjct 1325231 CATGTCCTTGCCTTCTTCGCAGCCTCCGACGGTATCGTCAACGAGAACCTCGTCGAG-CG 1325289 Query 125198 ATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255 |||||| | || ||| | || |||| ||| ||||| || || |||||||| ||| Sbjct 1325290 TTTCTCTAACGAAGTTCAGGCCGCC-GAGGC-TCGCTGCTTCTATGGCTTCCAAATTATG 1325347 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC- 125314 || |||||| | ||||| || | ||||| || || |||| |||||| || || Sbjct 1325348 ATGGAGAACATCCACTCTGAGACATACTCCCTCCTCATCGACACGTACATCAAAGACCCC 1325407 Query 125315 --GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 |||||| | ||| ||||| |||| |||| || | || | || || ||| Sbjct 1325408 AAGCAACGGGAGCAC---CTCTTCGACGCGGTCGAGACCATCCCTTGCATCAAGAAGAAG 1325464 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 ||| | |||| | ||||||||| ||| | |||||||||| ||| || | || || Sbjct 1325465 GCTGACTGGGCCCTCCGGTGGATCTCCGACAAGAAGTCTTCGTTCGCTGAACGTCTTGTC 1325524 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || ||||| ||||| ||||| || ||||| || || || ||| ||||||| |||||| Sbjct 1325525 GCCTTCGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTCTGGCTC 1325584 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| ||||||||||| || || || | |||||||| || || |||||| Sbjct 1325585 AAGAAGCGTGGACTCATGCCTGGTCTCACCTTCTCGAACGAGTTGATCAGCCGTGACGAG 1325644 Query 125553 GGCCTACACTGTGACTTTGCC 125573 ||| | ||| ||||| ||| Sbjct 1325645 GGCATGCACACCGACTTCGCC 1325665 Score = 185 bits (204), Expect = 1e-41 Identities = 381/560 (68%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| | |||||||| | || |||||||||| ||||||| ||||||||| || || Sbjct 1323797 ATTTGGCAGATGTACAAGACTGCCGAGGCCTCCTTCTGGACGGCCGAAGAGGTGGACCTC 1323738 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 | | ||||| |||||| | ||| | | | | || || | || || ||| Sbjct 1323737 GGCCACGACCTCGTGGATTGGCACCAACGTCTCAACAACAACGAACGCCACTTCATCTCG 1323678 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 || || |||||||||| |||| |||||| || || |||||||| ||||| || || ||| Sbjct 1323677 CATGTTCTGGCCTTCTTCGCCGCCTCCGACGGGATAGTCAACGAGAATCTCGTCGA-ACG 1323619 Query 125198 ATTCTCTCAAGAGTTGACCATTC-CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 |||||| | ||| | | | | |||| | || |||||||| ||||||||||||| Sbjct 1323618 CTTCTCTAACGAGGTT-CAAGCCGCAGAAGCCCGCTGTTTTTACGGCTTCCAAATCATGA 1323560 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGC 125316 | || || || || ||||||| |||||| |||||||| | || || || | | Sbjct 1323559 TGGAAAATGTCCATTCGGAAACGTACTCACTCCTGATTGATACATATATCAAAGACACCC 1323500 Query 125317 AA---CGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 || || | | | || || || || |||||||| ||||||| || || || | Sbjct 1323499 AAGAGCGGGACCGC---CTGTTCAATGCCATCGACACCGTGCCGTGCATCAAAAAGAAAG 1323443 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 | | |||| | || |||||| |||| | | || || | |||||| | ||||||| Sbjct 1323442 CAGATTGGGCCCTCCGCTGGATCTCTGACAAAAGATCCTCCTTCGCCGAGCGCCTGGTGG 1323383 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 | || || ||| || ||||| ||||| || || || || || || || ||||| | Sbjct 1323382 CGTTTGCGTGCGTCGAAGGCATATTCTTCTCCGGGTCCTTCGCCGCAATATTCTGGCTGA 1323323 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 |||| ||||| | ||||| || ||||| ||||| | || ||||||||| | Sbjct 1323322 AGAAACGCGGCTTAATGCCAGGCCTGACCTTTTCAAACGAACTGATCAGTCGAGACGAAG 1323263 Query 125554 GCCTACACTGTGACTTTGCC 125573 | | ||| ||||||||| Sbjct 1323262 GAATGCACACGGACTTTGCC 1323243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741054494274080