Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq5 104 2e-17 >seq5 Length=1807594 Score = 104 bits (114), Expect = 2e-17 Identities = 271/411 (66%), Gaps = 2/411 (0%) Strand=Plus/Plus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || ||||| || ||||| |||||| |||| ||| || || ||||||||||| || || Sbjct 1323241 CAGGCAAAGTCCGTGTGCATTCCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTCAGG 1323300 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270 || ||||| | || ||||| || | ||| ||||| || || || || || || || ||| Sbjct 1323301 CCTGGCATTAAGCCGCGTTTCTTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAGAAT 1323360 Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC-TC 13329 || ||||| || |||||||| | || | || | | | | || ||| || Sbjct 1323361 ATGCCTTCGACGCACGCAAACGCCACCAGGCGCTCGGC-GAAGGAGGATCTTTTGTCAGA 1323419 Query 13330 TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTT 13389 ||||| |||||| | |||||| | ||| | ||| || | || || || || Sbjct 1323420 GATCCAGCGGAGGGCCCAATCTGCTTTCTTTTTGATGCACGGCACGGTGTCGATGGCATT 1323479 Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACAT 13449 || | | || | ||||| ||||| ||||| |||| | ||| | Sbjct 1323480 GAACAGGCGGTCCCGCTCTTGGGTGTCTTTGATATATGTATCAATCAGGAGTGAGTACGT 1323539 Query 13450 TTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATAC 13509 ||| ||||| | |||||||||| |||||||| || |||||||| | || |||| | Sbjct 1323540 TTCCGAATGGACATTTTCCATCATGATTTGGAAGCCGTAAAAACAGCGGGCTTCTGCGGC 1323599 Query 13510 CTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTC 13560 ||||| ||| | || | ||| | | || ||||| ||||||||||| Sbjct 1323600 TTGAACCTCGTTAGAGAAGCGTTCGACGAGATTCTCGTTGACTATCCCGTC 1323650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430979731680216