Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 >seq3 Length=2064430 Score = 123 bits (136), Expect = 2e-23 Identities = 165/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAG-TCTGCCCTCATGTCCGTGTACTCTGCTCCGA 25795 |||||||||||| ||| |||| ||| ||| | || |||| ||||| ||| || | Sbjct 738933 CAGCTGATCCACGCCCTCTCCCGCATAGCTCTTGTCGCA-GTCCTCGTACTTTGCGCCAA 738875 Query 25796 AATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGC 25855 | | ||||||||||||||||| |||||||||||||| || || | || | | | Sbjct 738874 AGTGTCTCCACTGGAACCCGTATACCGGTCCTAGGTCCCCCTCGCGACGATGGCCCAGCC 738815 Query 25856 CCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGG 25915 ||| ||| ||||| || || | || || || |||||||||||||||| ||||| |||| Sbjct 738814 CCCGCTTCTCCAAGAACTCCTTCGACCCGTTCCCGTCCCAGATCTTTACGCCCTTGTCGG 738755 Query 25916 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 | ||| ||||||| || | || || |||||||| |||||| Sbjct 738754 ACAGCAGCTTGGAGTCCGTCGCGCCGTGCACAAACCACAGGAGCTCC 738708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340135494123084