Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 5e-12 >seq1 Length=3319996 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCT 48581 ||| || ||||||||||| || ||||| || || | | | || || | ||||| |||| Sbjct 2718547 ATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTG-CGGCCATCCTCGAGCT 2718605 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| || || | || | ||||||||| || || | || ||||| ||| ||| | Sbjct 2718606 GCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGAATCT 2718665 Query 48642 TCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACC 48699 || ||| | | | || ||||| || | ||||||| ||| | || ||||| || || Sbjct 2718666 TCGCCTTCACGTTGTCG--ATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCC 2718723 Query 48700 GGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||| || || || || |||||||| Sbjct 2718724 GGTGAGGGTCTTGACGAAGATCTGCAT 2718750 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || | | | || | |||||||||||||| || || | Sbjct 2718837 CTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGCTGCTTCCCCGCGAA 2718896 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 || | |||||||||||| || | || |||||||| || ||| ||| | | Sbjct 2718897 GATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTTCGCCTTCACGTT 2718956 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || |||||||||| ||||| ||| | || ||||| || ||||| ||||| || Sbjct 2718957 GTCG--ATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTAAGAGTCTTG 2719014 Query 48713 ACAAAAATCTGCAT 48726 || || |||||||| Sbjct 2719015 ACGAAGATCTGCAT 2719028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248591928508