Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq4 105 6e-18 >seq1 Length=3319996 Score = 109 bits (120), Expect = 5e-19 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGC 94861 ||| | ||| || ||||| || | ||| || ||| | ||||| || |||||||||| Sbjct 2718825 GTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGG--AGAGTGTACGACCATCCTCCAGC 2718882 Query 94862 TGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATT 94921 || || || | ||||| | | |||||||| ||||| ||||| || ||||| | || Sbjct 2718883 TGCTTCCCCGCGAAGATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATC 2718942 Query 94922 TTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCA 94981 || ||||| ||| | ||| || || | ||||| |||| ||||||||| || || Sbjct 2718943 TTCGCCTTCACGTTGTCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCG 2719002 Query 94982 GTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || || ||||||||||| Sbjct 2719003 GTAAGAGTCTTGACGAAGATCTGCAT 2719028 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | |||||| ||||| || | ||| |||||| | ||| | ||||| || || Sbjct 2719053 GTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTG 2719112 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || ||| ||||||| | | ||||| || || ||||| || || ||||| | || || Sbjct 2719113 CTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 2719172 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 |||||| ||| | ||| ||||| | ||||| || | ||||| || || || || Sbjct 2719173 TGCCTTCACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGT 2719232 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || ||||||||||| Sbjct 2719233 AAGGGTCTTGACGAAGATCTGCAT 2719256 >seq4 Length=1918071 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || | ||||| || | |||||| || || ||||| || || || Sbjct 1158491 ATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTT 1158550 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| || ||||||||| | ||| ||||| | | ||||| || | |||||| Sbjct 1158551 GTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGCGTGAT 1158610 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| | || ||||||||||||||||| Sbjct 1158611 AGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1158646 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 94799 ACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| || | || || ||||| || | ||| ||||| || ||| | ||||| Sbjct 1157981 ACCAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTC 1158040 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| | | |||||||| || ||||| ||||| ||||| | Sbjct 1158041 GAGCTGCTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTG 1158100 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||| ||| | ||| ||||| | ||||| |||| ||||| || || Sbjct 1158101 AATCTTCGCCTTTACGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTT 1158160 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || | || || || ||||||||||| Sbjct 1158161 TCCCGTCAACGTCTTGACGAAGATCTGCAT 1158190 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| ||| ||||| || | ||| || ||| | ||| ||| || Sbjct 1157702 CACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCATCTTC 1157761 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || || |||||| | ||||| | | ||||| || || || ||||| || ||||| | Sbjct 1157762 GAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTG 1157821 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | | | ||||| | ||||| |||| ||||| || || Sbjct 1157822 GATCTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCTT 1157881 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||| || || || || || ||||||||||||| Sbjct 1157882 TCCGGTGAGGGTCTTGACGAAGATCTGCATGC 1157913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288353350880