Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6 109 9e-20 seq1 84.2 3e-12 seq12 82.4 1e-11 >seq6 Length=1638385 Score = 109 bits (120), Expect = 9e-20 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| |||||||| ||||| || || |||||||| ||||||||| |||| Sbjct 603357 AGGTATCACCAAGCCCGCTATCCGCCGTCTTGCCCGCCGTGGTGGTGTCAAGCGTATCTC 603416 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGA 16580 ||| | |||| || |||| |||| |||| | |||||||||||| ||| Sbjct 603417 TGGTCTCATCTACGAGGAGACCCGTGGTGTTCTTAAGATCTTCCTCGAGA 603466 Score = 104 bits (114), Expect = 4e-18 Identities = 97/122 (80%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 16463 AACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAG 16522 |||| ||| || || |||||||| |||||||| ||||||||||| ||||| || |||||| Sbjct 483039 AACAACCA-GGTATTACCAAGCCCGCTATCCGCCGTCTGGCTCGCCGTGGAGGCGTCAAG 483097 Query 16523 CGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACC 16582 ||| ||||||| | |||| ||||||| || | ||| ||||||||||| | ||| | Sbjct 483098 CGTATCTCTGGCCTCATCTACGAAGAGACCCGAGGTGTCCTGAAGATCTTCTTGGAGAAC 483157 Query 16583 GT 16584 || Sbjct 483158 GT 483159 >seq1 Length=3319996 Score = 84.2 bits (92), Expect = 3e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 || || |||||||| || |||||||| || ||||||||| |||| || | |||| || Sbjct 1026314 GCCATTCGTCGTCTCGCACGTCGTGGAGGTGTCAAGCGTATCTCCGGCCTCATCTACGAG 1026255 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| ||| | ||| | || |||||| | ||| ||| |||| || | || ||| Sbjct 1026254 GAGACTCGCGGTGTCCTCAAAATCTTCTTGGAGAACGTCATCCGCGACTCCGTCACCTAC 1026195 Query 16607 ACCGAGCACGCTAA 16620 |||||||||||||| Sbjct 1026194 ACCGAGCACGCTAA 1026181 >seq12 Length=1095882 Score = 82.4 bits (90), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 |||||||| ||||| || |||||||| || ||||||||| |||| || ||| |||| || Sbjct 212329 GCTATCCGCCGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCGGGCTTGATCTACGAG 212270 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 |||| || | ||| | ||||||||||| ||| ||| Sbjct 212269 GAGACCCGCGGTGTGCTCAAGATCTTCCTTGAGAACGT 212232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074735532044