Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq4 100 2e-16 seq1 87.8 2e-12 >seq4 Length=1918071 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||| || | || || ||||||||||| || | Sbjct 1158646 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCC 1158587 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||| || ||||| || ||||| || Sbjct 1158586 GACACCATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1158527 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | || |||||||| ||||| |||| | | | | || || || ||| Sbjct 1158526 CAACGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCTGACTACAAC 1158467 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 ||||| || || || || |||| Sbjct 1158466 ATTCAGAAGGAGTCGACTCTTCA 1158444 >seq1 Length=3319996 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || |||| || ||||||||||| | Sbjct 2719256 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACGATCACTCTCGAAGTCGAGTCTTCG 2719197 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| ||||| || ||||| || ||||| || Sbjct 2719196 GACACGATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 2719137 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | ||||||||||||||| || | | | | | || |||||| ||| Sbjct 2719136 CAGCGCCTTATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGATTACAAC 2719077 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || || || ||||| |||| Sbjct 2719076 ATCCAGAAGGAGTCTACTCTTCA 2719054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933338158740