Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5 172 6e-38 >seq5 Length=1807594 Score = 172 bits (190), Expect = 6e-38 Identities = 376/561 (67%), Gaps = 9/561 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || |||||||| || | || ||||| || |||||||| || ||| || | Sbjct 1325668 GCAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGCTGATCAACTCGTTCGAGAAGGTGAG 1325609 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | ||||| || ||||||||||| || || || || || ||||| || || Sbjct 1325608 ACCAGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCAGAGAAGAA 1325549 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT--- 93267 ||||| || ||||| || || || |||| |||||| || || | || || | Sbjct 1325548 AATACCCTCGACGGCAGCGAAGGCGACAAGACGTTCAGCGAA---CGAAGACTTCTTGTC 1325492 Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| | ||||| || || || ||||| || ||||| | || |||| || Sbjct 1325491 GGAGATCCACCGGAGGGCCCAGTCAGCCTTCTTCTTGATGCAAGGGATGGTCTCGACCGC 1325432 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || |||| || || | | | ||| ||||| || ||||| | || || || Sbjct 1325431 GTCGAAGAGGTGCTCCCGTTGCTTGGGGTCTTTGATGTACGTGTCGATGAGGAGGGAGTA 1325372 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | ||||| |||| |||||||| ||||||||| || ||||| || | ||| || | Sbjct 1325371 TGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAGCCATAGAAGCAGCGAGCCTCGGC 1325312 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 | ||| ||||| | ||| || | ||| ||||| || || ||||| ||||| ||||| || Sbjct 1325311 GGCCTGAACTTCGTTAGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGC 1325252 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATC 93564 ||| || || || | | ||| | || || ||||| || || | || | | Sbjct 1325251 TGCGAAGAAGGCAAGGACATGGGAGACGAAGTGGCGCTCATTGTCGTTGAGACGCGTGTT 1325192 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| ||||| || || || || | || || | ||||| || || || || || Sbjct 1325191 CCAGTCGTGGAGATCCTTGGAGAGGTCCATCTCCTCCGCGGTCCAGAAAGAGGCCTCAGC 1325132 Query 93625 TTTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 1325131 CTTCTTGTACATTTGCCAGAT 1325111 Score = 158 bits (174), Expect = 1e-33 Identities = 301/442 (68%), Gaps = 6/442 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||| || || | ||||||||||| |||| || || || || | Sbjct 1323240 GCAGGCAAAGTCCGTGTGCATTCCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTCAG 1323299 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||||| | | || |||||||| ||||| ||||||| || || || || || || Sbjct 1323300 GCCTGGCATTAAGCCGCGTTTCTTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAGAA 1323359 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||| ||||| ||| ||||| ||||| | || ||||| || | ||| | || Sbjct 1323360 TATGCCTTCGACGCACGCAAACGCCACCAGGCGCTCGGCGAAG---GAGGATCTTTTGTC 1323416 Query 93271 ---GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 |||||| | |||||||| ||||| || || || || || | || ||||| || Sbjct 1323417 AGAGATCCAGCGGAGGGCCCAATCTGCTTTCTTTTTGATGCACGGCACGGTGTCGATGGC 1323476 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || ||| || ||||| | | ||| || |||||||| || | || || || Sbjct 1323477 ATTGAACAGGCGGTCCCGCTCTTGGGTGTCTTTGATATATGTATCAATCAGGAGTGAGTA 1323536 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | |||| ||||||||||| ||||| |||||||| ||||| ||||| | ||||| | Sbjct 1323537 CGTTTCCGAATGGACATTTTCCATCATGATTTGGAAGCCGTAAAAACAGCGGGCTTCTGC 1323596 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 | || || || | ||| || | || |||||||| || |||||||| || ||||| || Sbjct 1323597 GGCTTGAACCTCGTTAGAGAAGCGTTCGACGAGATTCTCGTTGACTATCCCGTCGGAGGC 1323656 Query 93508 TGCaaaaaaaGCCAATATATGC 93529 || || || |||| | |||| Sbjct 1323657 GGCGAAGAAGGCCAGAACATGC 1323678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857263933920