Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq4 127 2e-24 seq1 116 3e-21 >seq4 Length=1918071 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| || || |||| ||||| || || | || Sbjct 1158418 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAGACCATCACCCTTGAGGTAGAGTCGTCC 1158359 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||| || ||||||||||||||||| || ||||||||| Sbjct 1158358 GACACCATCGACAACGTTAAGGCAAAGATCCAAGACAAGGAGGGTATCCCTCCCGATCAA 1158299 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || |||||||| || ||||| || ||| ||||| | ||||| |||||| Sbjct 1158298 CAGCGTCTCATCTTTGCCGGAAAGCAGTTGGAAGATGGGCGCACGTTGTCCGACTACAAC 1158239 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || || || || || | ||| | ||| Sbjct 1158238 ATCCAGAAGGAGTCGACTCTCCATCTTGTT 1158209 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||| || ||||| || || || Sbjct 1158646 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCC 1158587 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| ||||| ||||| || Sbjct 1158586 GACACCATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1158527 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | |||||| ||| ||| |||| || |||||| Sbjct 1158526 CAACGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCTGACTACAAC 1158467 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 1158466 ATTCAGAAGGAGTCGAC 1158450 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || ||| |||| ||||| || ||| | || Sbjct 1158190 ATGCAGATCTTCGTCAAGACGTTGACGGGAAAGACGATCACCCTTGAGGTCGAATCGTCC 1158131 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || |||||||||||||| || ||||| || ||||| Sbjct 1158130 GACACGATCGACAACGTAAAGGCGAAGATTCAAGACAAGGAAGGCATTCCCCCGGATCAG 1158071 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| ||||||| | || ||||||||| Sbjct 1158070 CAGCGTCTTATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGTCGGATTACAAC 1158011 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || || || || ||| | ||| Sbjct 1158010 ATCCAGAAGGAGTCAACCCTCCAT 1157987 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||||||||| || || | || Sbjct 1157911 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACTATCACTCTTGAGGTCGAGTCTTCC 1157852 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || |||||||||||||| || ||||| || Sbjct 1157851 GACACGATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 1157792 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || || | || ||| ||||| ||||||| |||||| Sbjct 1157791 CAGCGCCTCATCTTCGCCGGAAAGCAACTCGAAGATGGACGCACGCTCTCCGACTACAAC 1157732 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 1157731 ATTCAGAAGGA 1157721 >seq1 Length=3319996 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || ||| ||||||| ||||| || | | Sbjct 2719256 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACGATCACTCTCGAAGTCGAGTCTTCG 2719197 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||| || || ||||||||||| ||||| ||||| || Sbjct 2719196 GACACGATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 2719137 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| ||||||||||| || | ||||| ||||||| |||||||||||||| Sbjct 2719136 CAGCGCCTTATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGATTACAAC 2719077 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 2719076 ATCCAGAAGGAGTCTAC 2719060 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || |||| ||||| || || | || Sbjct 2719028 ATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACCATCACGCTTGAGGTCGAGTCGTCC 2718969 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || || || ||||||||||||||||| || || ||||| Sbjct 2718968 GATACCATCGACAACGTGAAGGCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAG 2718909 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | |||||| || || ||||||| |||||| Sbjct 2718908 CAGCGCCTGATCTTCGCGGGGAAGCAGCTGGAGGATGGTCGTACACTCTCCGACTACAAC 2718849 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 2718848 ATCCAGAAGGAGTCGAC 2718832 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| | || ||||| | | Sbjct 2718750 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGTCTTCG 2718691 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || ||||| || ||||||||||| |||||||| || Sbjct 2718690 GACACCATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAGGGTATCCCACCCGACCAG 2718631 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| |||||| ||||||| || ||| Sbjct 2718630 CAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTATAAC 2718571 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 2718570 ATCCAGAAGGA 2718560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725401359020