Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5 289 5e-73 >seq5 Length=1807594 Score = 289 bits (320), Expect = 5e-73 Identities = 469/664 (71%), Gaps = 28/664 (4%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| ||||||||| |||||||| ||||| Sbjct 1325111 ATCTGGCAAATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCGGAGGAGATGGACCTC 1325170 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCT----GAGAACGAAAAGTTTTTCCTCAA 42415 ||||||| || |||| | | | |||| || || || ||| || Sbjct 1325171 TCCAAGGATCTCCACGACTGGAACACGC-GTCTCAACGACAATGAGCGCCACTTCGTCTC 1325229 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 | | || ||||||||||| ||||| ||||| || ||||| |||||||| | | | Sbjct 1325230 CCATGTCCTTGCCTTCTTCGCAGCCTCCGACGGTATCGTCAACGAGAACCTCGTCGAGCG 1325289 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 ||| || || || ||| | ||||| ||||||||||| |||||||| || || Sbjct 1325290 TTTCTCTAACGAAGTTCAGGCCGCCGAGGCTCGCTGCTTCTATGGCTTCCAAATTATGAT 1325349 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||||||| ||| || || || ||||||||||| || ||| Sbjct 1325350 GGAGAACATCCACTCTGAGACATACTCCCTCCTCATCGACACGTACATCAAAGACCCCA- 1325408 Query 42596 CGAGCGTAACGGG-----CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 ||| |||||| || ||| | || | ||||| || || ||||||||||||||| Sbjct 1325409 --AGC--AACGGGAGCACCTCTTCGACGCGGTCGAGACCATCCCTTGCATCAAGAAGAAG 1325464 Query 42651 GCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGT 42709 || |||||||| ||| |||||| | | || | | |||||| || | || || Sbjct 1325465 GCTGACTGGGCCCTCCGGTGGATCTCC-GACAAGAAGTCTTCGTTCGCTGAACGTCTTGT 1325523 Query 42710 AGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT 42769 ||||| | ||||||||||| || |||||||| ||| ||||||| |||||||||||||| Sbjct 1325524 CGCCTTCGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTCTGGCT 1325583 Query 42770 CAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACG 42828 |||| || || || ||||| || ||||||||||||||||| | |||||| | |||| Sbjct 1325584 CAAGAAGCGTGGACTC-ATGCCTGGTCTCACCTTCTCGAACGAGTTGATCAGCCGTGACG 1325642 Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCT 42888 |||| |||| | ||||| |||||||| || ||||| |||||||| | | || Sbjct 1325643 AGGGCATGCACACCGACTTCGCCTGCCTGCTCTTCTC---CCACCTCAAG---AGGCGGC 1325696 Query 42889 CGAAG---GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCC 42945 || | ||| ||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct 1325697 CGCACCCTGAGGTTGTCCGTAGGATCATCACGGAAGCCGTCAAGATCGAGCAGGAGTTCC 1325756 Query 42946 TCAC 42949 |||| Sbjct 1325757 TCAC 1325760 Score = 205 bits (226), Expect = 2e-47 Identities = 368/530 (69%), Gaps = 7/530 (1%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 |||||||||||||||||||| ||||| |||||||| ||||| || | | | ||| Sbjct 1323671 CTGGCCTTCTTCGCCGCCTCCGACGGGATAGTCAACGAGAATCTCGTCGAACGCTTCTCT 1323612 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || ||||| || | || || ||||| || ||||||||||| || || || || Sbjct 1323611 AACGAGGTTCAAGCCGCAGAAGCCCGCTGTTTTTACGGCTTCCAAATCATGATGGAAAAT 1323552 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 || || || || |||| | ||| | | || || ||| || || ||||| Sbjct 1323551 GTCCATTCGGAAACGTACTCACTCCTGATTGATACATATATCAAAGACACCCAAGAGCGG 1323492 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 || | |||||||| ||||| || || |||| |||||||| ||||| || || ||||| Sbjct 1323491 GACCGCCTGTTCAATGCCATCGACACCGTGCCGTGCATCAAAAAGAAAGCAGATTGGGCC 1323432 Query 42663 CTCAACTGGATCGA-GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 ||| ||||||| || || | | |||| |||| | ||||| || ||| | Sbjct 1323431 CTCCGCTGGATCTCTGACAAAAGATCCTCC-TTCGCCGAGCGCCTGGTGGCGTTTGCGTG 1323373 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGT 42781 |||||| ||||| |||||||| || |||||||| | || |||||||| ||| | | Sbjct 1323372 CGTCGAAGGCATATTCTTCTCCGGGTCCTTCGCCGCAATATTCTGGCTGAAGAAACGCGG 1323313 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 | ||||| || || ||||| || |||||||| ||||| | ||||| || |||| | Sbjct 1323312 CTTAATGCCAGGCCTGACCTTTTCAAACGAACTGATCAGTCGAGACGAAGGAATGCACAC 1323253 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGG 42900 |||||||||||||||||| ||| | | || || ||| || |||| ||| | Sbjct 1323252 GGACTTTGCCTGCCTCCTCTTC-CAA--CATCTGCGGC-GGAGACCTCATCCGGATATCG 1323197 Query 42901 TCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 | | |||| |||| ||||| || || || |||||||| ||||||||| Sbjct 1323196 TTCTTTCCATGGTCACCGAGGCAGTTGAAATTGAGAAGGAATTCCTCACG 1323147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333203446080