Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq5 123 5e-23 seq3 98.7 2e-15 seq9 84.2 5e-11 >seq5 Length=1807594 Score = 123 bits (136), Expect = 5e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603 |||||| | || ||| ||| |||||||||||| | | |||||| | ||||||||||| Sbjct 1325814 GACGCTCTGCCGTGCGCGCTCATTGGCATGAACGCGAAGCTCATGTGCCAGTACATCGAG 1325873 Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663 ||||| ||||||||| | || | || || || | ||||| | ||||| || ||| Sbjct 1325874 TTCGTGGCCGACCGCCTGCTCGTTGCCCTCGGCGACGAGAAGTTCTACAAGGTCACCAAC 1325933 Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723 || || | ||| ||||| | || ||||| || || || || ||||||||||| |||||| Sbjct 1325934 CCTTTCGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGT 1325993 Query 243724 GTCAGTGATTA 243734 ||| ||||| Sbjct 1325994 GTCTCAGATTA 1326004 >seq3 Length=2064430 Score = 98.7 bits (108), Expect = 2e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 59870 TTTGAGGGTGCGTTGAAACTCAAAGAAATCTCGTATATTCACGCAGAGGGGTTCCTGGGA 59929 || ||||||||| | || |||| || |||||||| || ||| | ||||| |||| | Sbjct 1782409 TTGGAGGGTGCGCTCAAGATCAAGGAGATCTCGTACATGCACTCCGAGGGTATCCTTGCC 1782468 Query 59930 GGCGAGTTGAAACACGGTCCCCTCGCACTCCTCGACGATAAAATCCCCGTCATC 59983 |||||| | || ||||||||||| |||||| ||||||| || || ||||||||| Sbjct 1782469 GGCGAGCTCAAGCACGGTCCCCTTGCACTCATCGACGAGAACATGCCCGTCATC 1782522 >seq9 Length=1298041 Score = 84.2 bits (92), Expect = 5e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 334134 CCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCA 334193 ||||||| |||||| || ||||| || | | | || | |||||||| || || Sbjct 626968 CCGTCGATATCGTGCTCGACGTAGAAGGTACGGACATCGTCGGGTGAGGGGAAGCCCTCG 626909 Query 334194 AGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACAC 334253 | ||| ||||| ||||||||||| || || || || || | ||||| | || ||| Sbjct 626908 ACCTGGCCGTTGGTGATAGCGCGCATGAGGGTGGACTTTCCGGTACCGTTGCGACCGCAC 626849 Query 334254 AGACCGTAGCGGTTTCCACGCTTCAGATTGAACCG-CGTATTGTTCAGAAGAATTTTTCC 334312 ||||||||||||| |||||||| ||| ||| | | |||| || || || || | Sbjct 626848 AGACCGTAGCGGTGACCACGCTTGAGA-CGAAGGGTGGCGGTGTTGAGCAGGATCTTGGC 626790 Query 334313 ACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACCGACTTC 334360 ||| || || || || || | || | || |||||||| || |||| Sbjct 626789 ACCGTAGGCGAGGGAGAACTGGCAGTTGCAAAGATCCTCGCCCTCTTC 626742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102872821629800