Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5 125 9e-24 seq42 93.3 5e-14 seq8 82.4 9e-11 >seq5 Length=1807594 Score = 125 bits (138), Expect = 9e-24 Identities = 333/504 (66%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||||||| ||| | || ||||||||| || || |||||||| || |||||| Sbjct 1325646 CCCTCGTCACGGCTGATCAACTCGTTCGAGAAGGTGAGACCAGGCATGAGTCCACGCTTC 1325587 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | || || || |||||||| || ||||| || ||||| Sbjct 1325586 TTGAGCCAGAAGATGGACGCGAAGGAGCCAGAGAAGAAAATACCCTCGACGGCAGCGAAG 1325527 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCATCGCCCAC 126241 || | ||||| ||||| || || ||||| |||| | |||| | ||||| Sbjct 1325526 GCGACAAGACGTTCAGCGAACGA---AGACTTCTTGTCGGAGATCCACCGGAGGGCCCAG 1325470 Query 126242 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 126301 | ||||| |||| ||| || |||| ||||| || ||| || ||||| | || | || Sbjct 1325469 TCAGCCTTCTTCTTGATGCAAGGGATGGTCTCGACCGCGTCGAAGAGGTGCTCCCGTTGC 1325410 Query 126302 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TTC 126360 || |||||||||||| | || ||||| || ||||| || ||||| | | | Sbjct 1325409 TTGGGGTCTTTGATGTACGTGTCGATGAGGAGGGAGTATGTCTCAGAGTGGATGTTCTCC 1325350 Query 126361 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAA 126420 || || || | | ||||| |||| || ||| ||| || || | | || Sbjct 1325349 ATCAT-AATTTGGAAGCCATAGAAGCAGCGAGCCTCGGCGGCCTGAACTTCGTTAGAGAA 1325291 Query 126421 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATA 126480 | | || ||||| || || || ||||| | || || || || |||| || Sbjct 1325290 ACGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCTGCGAAGAAGGCAAGGACATG 1325231 Query 126481 CTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGA 126537 | ||| | | ||||| ||||| | | || |||||||||| |||||||| || Sbjct 1325230 GGAGACGAAGTGGCGCTCATTGTCGTTGAGACGCGTGTTCCAGTCGTGGAGATCCTTGGA 1325171 Query 126538 GAGATCTACCTCCTCCGCAGTCCA 126561 ||| || | ||||||||| ||||| Sbjct 1325170 GAGGTCCATCTCCTCCGCGGTCCA 1325147 Score = 91.5 bits (100), Expect = 2e-13 Identities = 219/330 (66%), Gaps = 6/330 (2%) Strand=Plus/Plus Query 125953 GATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTGAATGGTGTCCACCCC 126012 || ||| ||||||||||||| || || || || |||| ||| | | ||| Sbjct 1323150 GAGGAATTCCTTCTCAATTTCAACTGCCTCGGTGACCATGGAAAGAACGATATCCGGATG 1323209 Query 126013 AGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCTTGGTGGAGACCCTCGTC 126072 |||||| |||| | | |||||| |||||| || ||| | || ||||| Sbjct 1323210 AGGTCTCCGCCGCAGATGTTGGAAGAGGAGGCAGGCAAAGTCCGTGTGCATTCCTTCGTC 1323269 Query 126073 ACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCA 126132 || ||| ||||| || || ||| ||| |||||||| | || || ||||||| ||| Sbjct 1323270 TCGACTGATCAGTTCGTTTGAAAAGGTCAGGCCTGGCATTAAGCCGCGTTTCTTCAGCCA 1323329 Query 126133 GAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAG 126192 ||| || || || || || |||||||| || || || || ||||| ||||| | || Sbjct 1323330 GAATATTGCGGCGAAGGACCCGGAGAAGAATATGCCTTCGACGCACGCAAACGCCACCAG 1323389 Query 126193 ACGCTCAGCAAAGGAGCGCGACTTTGTGTCA---AACCACTTCATCGCCCACTGCGCCTT 126249 ||||| || |||||| || || ||||| | ||| | ||||| | || || Sbjct 1323390 GCGCTCGGCGAAGGAG---GATCTTTTGTCAGAGATCCAGCGGAGGGCCCAATCTGCTTT 1323446 Query 126250 TTTCTCGATACACGGGACGGTCTGGATCGC 126279 || | ||| ||||| ||||| | ||| || Sbjct 1323447 CTTTTTGATGCACGGCACGGTGTCGATGGC 1323476 >seq42 Length=219827 Score = 93.3 bits (102), Expect = 5e-14 Identities = 204/302 (68%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 172651 ATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATACTCCTTACC 172710 ||| ||||| ||||| || ||||||| || || || ||| ||| ||||| Sbjct 65993 ATCAGTCATGATCATTAGTTGACCATATCGCAGGTCTTTCGTATCCCTATAGTCCTTGTT 66052 Query 172711 CTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGC 172770 ||||| ||||| | ||||||||||| || | || ||| | || ||| ||| | Sbjct 66053 GTGTTGTAGACCGAGGATCTTCTTGATATTCTGGATCTCCTCATTCTTCATGATTTG-GT 66111 Query 172771 CACTGAA--GCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGA 172828 || || || || || || || || ||||| || |||||||| || |||| Sbjct 66112 CA-TGCTTGGCGTCACGAACGTTGAGTAGTTTACCACGAAGGGGGAACACGCCATAGTTG 66170 Query 172829 TCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTC 172888 ||||| || | ||| |||||||| | || || | ||| ||||| || || ||||| Sbjct 66171 TCACGCCCGATGACACTGAGACCAGCGATAGCTAGAGACTTGGCGGAGTCTCCTTCCGTG 66230 Query 172889 ACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTCCAACTTG 172948 | |||||| ||||| | | | | || | || || || |||||||||||| ||||||| Sbjct 66231 AGGATGAGAGTACAATCTGCCGCTTTTCGTGTACCAGCGTTGTTCGCATCGGCCAACTTC 66290 Query 172949 GG 172950 || Sbjct 66291 GG 66292 >seq8 Length=1462401 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 115110 TGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCA---GC 115166 ||||| | ||||||| || ||||| |||||| |||| | | ||||||||| || Sbjct 1395123 TGAGAGTATCGTAGATACCTTCGATGGAGTCATCCTTCATACATACAAGGAAGCATGAGC 1395064 Query 115167 TCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACA 115226 | | || || ||||| || |||||||||||||| |||| ||||||| |||| Sbjct 1395063 TGAGC---TGAGGATGAGGTGTTCCGGCGTTGAAGAGGGTGGGTGACGCGTGGGTGAAGT 1395007 Query 115227 TACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATAC 115286 | ||||||||| | |||||| || | | | | || || | |||||||| | Sbjct 1395006 AGCGTTGGGACATAAGTTGGTAGGTTTCGATGGCCCGGTCGATATCGTTACCGTGAATGC 1394947 Query 115287 CGATCGAGACCCGCATAAACATGTATTGGGGT 115318 ||| | || ||||| ||||||| |||||| Sbjct 1394946 CGACAGCCACACGCATCAACATGTGCTGGGGT 1394915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349806804640