Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq4 113 5e-20 seq1 113 5e-20 >seq4 Length=1918071 Score = 113 bits (124), Expect = 5e-20 Identities = 143/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| | ||| || || |||| || ||||||||||||||||| Sbjct 1157999 CTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 1158058 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || |||||||| || | || | || ||||||| | ||| | || | | ||| Sbjct 1158059 GATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGT-CTTGAATCTTCGCCTTTACGT 1158117 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||||| |||||| || || | ||||| || || ||||| | |||||| | Sbjct 1158118 TGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTTTCCCGTCAACGTCTTGA 1158177 Query 42196 CAAAGATTTGCATT 42209 | ||||| |||||| Sbjct 1158178 CGAAGATCTGCATT 1158191 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41980 GACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 42039 |||| || | | ||| | |||||| |||| || |||||||| ||||| ||||| || | Sbjct 1157683 GACCGCCACGGAGACGAAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGG 1157742 Query 42040 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTG 42099 || || || | || || || ||||| || ||||| ||||| ||||||||||||| | Sbjct 1157743 AGAGCGTGCGTCCATCTTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCG 1157802 Query 42100 GCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158 | | | |||||||||| ||| || || | ||| | | | ||||||| || || Sbjct 1157803 GGATACCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCAATCGTGTCGGAAGACTCG 1157861 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||| || || || || || ||||| || ||||| ||||| Sbjct 1157862 ACCTCAAGAGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1157911 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || ||| | || || | |||||| || || || Sbjct 1158227 CTCCTTCTGGATGTTGTAGTCGGACAACGTGCGCCCATCTTCCAACTGCTTTCCGGCAAA 1158286 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||| || |||| || | | ||||||||| ||| ||| || | ||| Sbjct 1158287 GATGAGACGCTGTTGATCGGGAGGGATACCCTCCTTGTCTTGGATCTTTGCCTTAA-CGT 1158345 Query 42137 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| ||| || || || | |||||||| ||||| || |||||||| | Sbjct 1158346 TGTCGATGGTGTCGGACGACTCTACCTCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGA 1158405 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1158406 CGAAGATTTGCAT 1158418 >seq1 Length=3319996 Score = 113 bits (124), Expect = 5e-20 Identities = 154/211 (73%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 42000 ACCAA-ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| ||||| ||||||||||| || || || || || | ||||| || | || || Sbjct 2718541 ACCAAGATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTC 2718600 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||| || ||||| ||||| ||||||||||||| ||| | | |||||| ||| | Sbjct 2718601 GAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCC-T 2718659 Query 42119 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177 || | || | | ||| | | | ||||| || ||||| || | |||||||| | Sbjct 2718660 GAATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCT 2718719 Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || ||||| || ||||| ||||| Sbjct 2718720 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2718750 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| | || || || |||| || || ||||| || || || Sbjct 2719065 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAA 2719124 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||||| || | || |||||||||| ||| ||| || | ||| Sbjct 2719125 GATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCA-CGT 2719183 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || || || |||| ||||| || |||||||| || ||||| | Sbjct 2719184 TGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTGA 2719243 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 2719244 CGAAGATCTGCAT 2719256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543209350598720