Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq4 104 2e-17 >seq1 Length=3319996 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || || |||| || || || || || ||||||||||| | Sbjct 2719029 ACCACCGCGAAGACGGAGGACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGA 2719088 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || || |||||||||||| | || || |||||||||||||| || Sbjct 2719089 GAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGG 2719148 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || ||| ||| || || | || || | || || Sbjct 2719149 AATGCCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATCGTGTCCGAAGACTCGAC 2719208 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | |||||||| || | || || ||||| || ||||| Sbjct 2719209 TTCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2719256 >seq4 Length=1918071 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | ||||| || || || |||||||| || | | |||||| | ||| Sbjct 1158207 AGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTGCGCCCATCT 1158266 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | |||||| |||||| | ||||| ||||| || |||||||| || || || || ||| Sbjct 1158267 TCCAACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGGAGGGATACCCTCCTTGTCT 1158326 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| || || | || || | || || || | || | |||| Sbjct 1158327 TGGATCTTTGCCTTAACGTTGTCGATGGTGTCGGACGACTCTACCTCAAGGGTGATGGTC 1158386 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || ||||| |||||||| Sbjct 1158387 TTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 1158418 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || |||| ||||| || || ||||||||||| || | Sbjct 1158419 ACCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGA 1158478 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||| || | || || ||||||||||| || | || | || ||||||||||| || Sbjct 1158479 GAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTCGGGGGG 1158538 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | || || || || || Sbjct 1158539 AATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 1158598 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | |||||||| ||||| || || || || || ||||| Sbjct 1158599 TTCGAGCGTGATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1158646 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||| | || || || || || ||||||||||| | | |||||| |||| || ||| Sbjct 1157985 AGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTCGAGC 1158044 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||| || || | || || |||||||| || || ||||| ||||| || ||||| || Sbjct 1158045 TGCTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTGAATC 1158104 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || |||||| || | || || | || || || | || | ||||| || Sbjct 1158105 TTCGCCTTTACGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTTTCCC 1158164 Query 64418 GTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| || || ||||| || |||||| Sbjct 1158165 GTCAACGTCTTGACGAAGATCTGCATT 1158191 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | |||||| | || | ||| || || ||||||||||| || | Sbjct 1157684 ACCGCCACGGAGACGAAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGA 1157743 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | ||||| || ||||| ||||| | ||||| |||||||||||||| || Sbjct 1157744 GAGCGTGCGTCCATCTTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGG 1157803 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || | || || Sbjct 1157804 GATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGAC 1157863 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | ||||| ||||| | || || ||||| || ||||| Sbjct 1157864 CTCAAGAGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1157911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499641627255520