Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq5 114 1e-20 seq4 102 8e-17 seq8 98.7 1e-15 seq1 93.3 4e-14 >seq5 Length=1807594 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 52649 CGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTT 52708 ||| |||||| || ||| | |||||||||||| || ||||||| ||||||||||||| Sbjct 1325816 CGCTCTGCCGTGCGCGCTCATTGGCATGAACGCGAAGCTCATGTGCCAGTACATCGAGTT 1325875 Query 52709 TGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCC 52768 ||||| || || ||| | || ||||| | |||| || ||| | ||| || Sbjct 1325876 CGTGGCCGACCGCCTGCTCGTTGCCCTCGGCGACGAGAAGTTCTACAAGGTCACCAACCC 1325935 Query 52769 GTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 || || || ||| ||| || ||||| |||||||||||||||| ||||||||||| || Sbjct 1325936 TTTCGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGT 1325995 Query 52829 C 52829 | Sbjct 1325996 C 1325996 Score = 93.3 bits (102), Expect = 4e-14 Identities = 120/164 (73%), Gaps = 4/164 (2%) Strand=Plus/Minus Query 52392 GCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCC 52451 ||||||||| ||||||| || || ||||| ||| | || || ||||| ||| ||| Sbjct 1323398 GCCGAGCGCCTGGTGGCGTTTGCGTGCGTCGAAGGCATATTCTTCTCCGGGTCCTTCGCC 1323339 Query 52452 GCCATCTTTTACATTAA--AACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGT 52509 || || || | | || |||| ||| ||||||| |||||||| || ||||| Sbjct 1323338 GCAATATTCTGGCTGAAGAAACGC--GGCTTAATGCCAGGCCTGACCTTTTCAAACGAAC 1323281 Query 52510 TGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTC 52553 |||| || ||||||||| |||||||||||||||| |||||| Sbjct 1323280 TGATCAGTCGAGACGAAGGAATGCACACGGACTTTGCCTGCCTC 1323237 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC-CATGTGCGAGTACATCGAGTT 52708 ||| |||| |||| || | || ||||||| || || |||| || | |||||||| || Sbjct 1323088 GCGTTGCCAGTCGGCCTTATCGGTATGAACGT-CACTCTCATGCGCCAATACATCGAATT 1323030 Query 52709 TGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCC 52768 || |||||||| || |||| ||| || | | ||| | | || | |||||| Sbjct 1323029 CGTCGCGGATCGCCTTCTGGTTTCGCTTGGAAATGCGAAGCATTATCACACCGCCAATCC 1322970 Query 52769 GTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 || || | ||| ||| ||||| || ||||||||||||||||||| |||||||| || Sbjct 1322969 CTTCGAATGGATGGACATGATTTCCCTCCAGGGCAAGACCAACTTTTTTGAGAAGCGTGT 1322910 >seq4 Length=1918071 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | | |||||||| || |||||||||||| | Sbjct 1158192 CCACCACGGAGACGGAGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1158251 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| || || | || || |||| | |||| ||||||||||| || ||||| Sbjct 1158252 AACGTGCGCCCATCTTCCAACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGGAGGG 1158311 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| || | |||| |||| ||| || | |||||||| |||||| | Sbjct 1158312 ATACCCTCCTTGTC-TTGGATCTTTGCCTTAACGTTG-TCGATGGTGTCGGACGACTCTA 1158369 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || || || || || || || ||||| Sbjct 1158370 CCTCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 1158418 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| | ||||| |||||||| || || || | Sbjct 1158453 GACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCG 1158512 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | || || ||||| || || || || || ||||| ||| | || | || | Sbjct 1158513 AAGATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTC-CTGAATCTTCGCCTTGAC 1158571 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||||| ||||| || |||| ||| | || || ||||||| || | Sbjct 1158572 GTTG-TCGATGGTGTCGGAGGACTCGACTTCGAGCGTGATAGTCTTGCCAGTCAAGGTCT 1158630 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 1158631 TCACAAAGATCTGCAT 1158646 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||| | || || || |||||||| || |||| | Sbjct 1157720 CTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCATCTTCGAGTTGCTTTCCGGCGAA 1157779 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||| ||||| || || ||||| || ||||| ||| || || | | Sbjct 1157780 GATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 1157839 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||| ||||| | || | || || || || || || || || Sbjct 1157840 GTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCTTTCCGGTGAGGGTCTTGAC 1157899 Query 138603 AAAAATCTGCATGGCT 138618 || ||||||||| || Sbjct 1157900 GAAGATCTGCATGCCT 1157915 >seq8 Length=1462401 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 154326 AAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATG 154385 ||||||||||| |||||| || || |||| ||| | |||| ||||||||| Sbjct 1395034 AAGAGGGTGGGTGACGCGTGGGTGAAGTAGCGTTGGGACATAAGTTGGTAGGTTTCGATG 1394975 Query 154386 GCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGA 154445 || |||||||| | ||||||||||||| || || ||||| | ||||||||| || Sbjct 1394974 GCCCGGTCGATATCGTTACCGTGAATGCCGACAGCCACACGCATCAACATGTGCTGGGGT 1394915 Query 154446 CGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCG 154505 ||||| ||| | || |||||||| || ||| | ||||||||| ||| ||||| Sbjct 1394914 CGTTCAGCGGTACGGCCGTTGATCTTCAACAGGTATGAACGTTCGAGGGTCTTGAAACCG 1394855 Query 154506 AA 154507 || Sbjct 1394854 AA 1394853 >seq1 Length=3319996 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| ||||| || || || || | Sbjct 2718835 GACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGCTGCTTCCCCGCG 2718894 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| || |||||||| ||||| || ||||| ||| || || | Sbjct 2718895 AAGATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTTCGCCTTCACG 2718954 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||| |||| |||||| ||||| | ||| | || || || || ||||| || Sbjct 2718955 TTGTCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTAAGAGTCTTG 2719014 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 2719015 ACGAAGATCTGCAT 2719028 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| ||| | || || |||||||||||| || |||| | Sbjct 2719063 GACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCA 2719122 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || || || ||||| ||| ||| || | Sbjct 2719123 AAGATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACG 2719182 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| || |||| || | ||| || || || || || || Sbjct 2719183 TTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTG 2719242 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 2719243 ACGAAGATCTGCAT 2719256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259248733760