Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq4 120 3e-22 seq1 111 1e-19 seq5 102 8e-17 >seq4 Length=1918071 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| || | || || ||| || ||||| || ||| Sbjct 1158450 GTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCA 1158509 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| || ||||| ||||| || ||||||||||||||| || ||| |||| Sbjct 1158510 GCGAAGATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTG 1158569 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | ||||||||||| || | || ||||| |||| || Sbjct 1158570 ACGTTG-TCGATGGTGTCGGAGGACTCGACTTCGAGCGTGATAGTCTTGCCAGTCAAGGT 1158628 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 1158629 CTTCACAAAGATCTGCAT 1158646 Score = 111 bits (122), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | |||| ||| || ||||| ||||| ||| | |||||| ||| || Sbjct 1157702 CACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCATCTTC 1157761 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 || || ||||| ||| |||| | |||||||| ||||| || || |||||||||||| Sbjct 1157762 GAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTG 1157821 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| ||| ||| | |||| || | ||||| | | |||||| || | || | || | Sbjct 1157822 GATCTTCGCCTTCACGTTG-TCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCT 1157880 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | ||||| || || || || || ||||||||| || Sbjct 1157881 TTCCGGTGAGGGTCTTGACGAAGATCTGCATGCCT 1157915 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | || | ||| | || ||||| || || || ||||| ||| Sbjct 1158191 TCCACCACGGAGACGGAGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1158250 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || |||||| ||| || | ||| ||||| || |||| | ||||| ||||||||||| Sbjct 1158251 CAACGTGCGCCCATCTTCCAACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGGAGG 1158310 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || ||||||||||| ||| || ||| | |||| |||| |||||| | ||| | Sbjct 1158311 GATACCCTCCTTGTCTTGGATCTTTGCCTTAACGTTG-TCGATGGTGTCGGACGACTCTA 1158369 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | ||| | || |||||||| || || || || || || ||||| Sbjct 1158370 CCTCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 1158418 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 126905 ACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | || ||||| || || || |||||||| || ||||| || || Sbjct 1157981 ACCAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTC 1158040 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || |||||| |||| | ||||||||||| || || ||||| |||||||| Sbjct 1158041 GAGCTGCTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTG 1158100 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 || ||| ||| | |||| |||| ||||| | ||||| || | ||| | ||| | Sbjct 1158101 AATCTTCGCCTTTACGTTG-TCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCT 1158159 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || |||| || || || || |||||||| Sbjct 1158160 TTCCCGTCAACGTCTTGACGAAGATCTGCAT 1158190 >seq1 Length=3319996 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||||||| | ||||| || || || || || || Sbjct 2719060 GTAGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 2719119 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| ||||| || ||||||||||||||| ||| || ||| Sbjct 2719120 GCAAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTC 2719179 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||||| | ||||||||||| || | ||| ||||| || || || Sbjct 2719180 ACGTTG-TCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGTAAGGGT 2719238 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 2719239 CTTGACGAAGATCTGCAT 2719256 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | || ||| ||| || ||||| || || Sbjct 2718832 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGCTGCTTCCCC 2718891 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| ||||||||||| ||||| || ||||||||||| ||| ||| ||| Sbjct 2718892 GCGAAGATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTTCGCCTTC 2718951 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||| || | |||||| || | || | || |||||||| ||||| Sbjct 2718952 ACGTTG-TCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTAAGAGT 2719010 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 2719011 CTTGACGAAGATCTGCAT 2719028 >seq5 Length=1807594 Score = 102 bits (112), Expect = 8e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCAC 47498 ||||||||||| ||||| || ||||| || ||| ||| || | ||| ||| ||| Sbjct 1323040 TACATCGAATTCGTCGCGGATCGCCTTCTGGTTTCGCTTGGAAATGCGAAGCATTATCAC 1322981 Query 47499 ACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTC 47558 |||| ||||| ||||| | ||| ||| ||||| ||| ||||||||||||||||||| Sbjct 1322980 ACCGCCAATCCCTTCGAATGGATGGACATGATTTCCCTCCAGGGCAAGACCAACTTTTTT 1322921 Query 47559 GAGAAGCGCGTCGGCGAATATAAA 47582 |||||||| || ||| ||| || Sbjct 1322920 GAGAAGCGTGTGTCCGACTATCAA 1322897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497780569920