Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 3e-15 seq1 95.1 1e-14 >seq4 Length=1918071 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||| || || || || || || ||| ||| || Sbjct 1158438 ACGAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGGCCATCCTCG 1158497 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || ||| | ||||| ||||||||||| || |||||||| || || || ||| Sbjct 1158498 AGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 1158557 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | ||||||||| |||||||||||||| || | || || Sbjct 1158558 ATCTTCGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGCGTGATAGTCTT 1158616 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || | || || ||||| || ||||| Sbjct 1158617 GCCAGTCAAGGTCTTCACAAAGATCTGCAT 1158646 >seq1 Length=3319996 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || || || || || || ||||| ||||| || |||||| Sbjct 2719027 ATACCACCGCGAAGACGGAGGACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCG 2719086 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| || || | ||| || || || | || | || |||||||| || Sbjct 2719087 GAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGG 2719146 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || || || || ||| || | || | || | ||||| |||||||| Sbjct 2719147 GGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCA-CGTTGTCGATCGTGTCCGAAGACTC 2719205 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||||||| | ||| ||||| || || || || || || || ||||| Sbjct 2719206 GACTTCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2719256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000329779680