Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 134 2e-26 seq42 93.3 5e-14 >seq5 Length=1807594 Score = 134 bits (148), Expect = 2e-26 Identities = 335/504 (66%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||||||| ||| | || ||||||||| ||||| |||||||| || |||||| Sbjct 1325646 CCCTCGTCACGGCTGATCAACTCGTTCGAGAAGGTGAGACCAGGCATGAGTCCACGCTTC 1325587 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | |||||| || | || |||||||||||||| || ||||| || ||||| Sbjct 1325586 TTGAGCCAGAAGATGGACGCGAAGGAGCCAGAGAAGAAAATACCCTCGACGGCAGCGAAG 1325527 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 127714 || | ||||| || || || || ||||| | || | |||| | ||||| Sbjct 1325526 GCGACAAGACGTTCAGCGAACGA---AGACTTCTTGTCGGAGATCCACCGGAGGGCCCAG 1325470 Query 127715 TGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 127774 | ||||| |||| ||| || |||| ||||| || ||| || ||||| | || | || Sbjct 1325469 TCAGCCTTCTTCTTGATGCAAGGGATGGTCTCGACCGCGTCGAAGAGGTGCTCCCGTTGC 1325410 Query 127775 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TTC 127833 || |||||||||||| | || ||||| || ||||| || ||||| | | | Sbjct 1325409 TTGGGGTCTTTGATGTACGTGTCGATGAGGAGGGAGTATGTCTCAGAGTGGATGTTCTCC 1325350 Query 127834 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAA 127893 || || || | | ||||| |||| || ||| ||| || || | | || Sbjct 1325349 ATCAT-AATTTGGAAGCCATAGAAGCAGCGAGCCTCGGCGGCCTGAACTTCGTTAGAGAA 1325291 Query 127894 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATA 127953 | | || ||||| || || || ||||| | || || || || |||| || Sbjct 1325290 ACGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCTGCGAAGAAGGCAAGGACATG 1325231 Query 127954 CTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTGA 128010 | ||| | | ||||| ||||| | | || |||||||||| ||||||||| || Sbjct 1325230 GGAGACGAAGTGGCGCTCATTGTCGTTGAGACGCGTGTTCCAGTCGTGGAGATCCTTGGA 1325171 Query 128011 GAGATCTACCTCCTCCGCAGTCCA 128034 ||| || | ||||||||| ||||| Sbjct 1325170 GAGGTCCATCTCCTCCGCGGTCCA 1325147 >seq42 Length=219827 Score = 93.3 bits (102), Expect = 5e-14 Identities = 204/302 (68%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 176671 ATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACC 176730 ||| ||||| ||||| || ||||||| || || || ||| ||| ||||| Sbjct 65993 ATCAGTCATGATCATTAGTTGACCATATCGCAGGTCTTTCGTATCCCTATAGTCCTTGTT 66052 Query 176731 TTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGC 176790 ||||| ||||| | |||||||||| || | || ||| | || ||| ||| | Sbjct 66053 GTGTTGTAGACCGAGGATCTTCTTGATATTCTGGATCTCCTCATTCTTCATGATTTG-GT 66111 Query 176791 CACTGAA--GCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGA 176848 || || ||||| || || || || || || || |||||||| || |||| Sbjct 66112 CA-TGCTTGGCGTCACGAACGTTGAGTAGTTTACCACGAAGGGGGAACACGCCATAGTTG 66170 Query 176849 TCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTC 176908 ||||| || | ||| ||||||||| | || || | ||| ||||| || || ||||| Sbjct 66171 TCACGCCCGATGACACTGAGACCAGCGATAGCTAGAGACTTGGCGGAGTCTCCTTCCGTG 66230 Query 176909 ACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTCCAACTTG 176968 | |||||| ||||| | | | | || | || || || |||||||||||| ||||||| Sbjct 66231 AGGATGAGAGTACAATCTGCCGCTTTTCGTGTACCAGCGTTGTTCGCATCGGCCAACTTC 66290 Query 176969 GG 176970 || Sbjct 66291 GG 66292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503304229280