Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq5 165 1e-35 seq8 98.7 2e-15 >seq5 Length=1807594 Score = 165 bits (182), Expect = 1e-35 Identities = 373/558 (67%), Gaps = 2/558 (0%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || |||||||| |||||||| ||||| ||| ||||| ||| ||| | ||||| || Sbjct 1323232 AAGAGGAGGCAGGCAAAGTCCGTGTGCATTCCTTCGTCTCGACTGATCAGTTCGTTTGAA 1323291 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | ||||| ||||| | || || || ||||| || || || || || | ||| Sbjct 1323292 AAGGTCAGGCCTGGCATTAAGCCGCGTTTCTTCAGCCAGAATATTGCGGCGAAGGACCCG 1323351 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || || || || || ||| |||||||||||| || | ||| | || |||| | Sbjct 1323352 GAGAAGAATATGCCTTCGACGCACGCAAACGCCACCAGGCGCTCGGCGAAGGAGGATCTT 1323411 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153 ||||| | |||| | |||||| || || |||||| ||||||||||| | ||| Sbjct 1323412 TTGTCAGAGATCCAGCGGAGGGCCCAATCTGCTTTCTTTTTGATGCACGGCACGGTGTCG 1323471 Query 160154 ACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTC 160213 | ||| || |||| | |||| |||| | || ||||| ||| ||||||| Sbjct 1323472 ATGGCATTGAACAGGCGGTCCCGCTCTTGGGTGTCTTTGATATATGTATCAATCAGGAGT 1323531 Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273 |||||| |||| | || |||||||| || || || ||| ||| ||| | | | | Sbjct 1323532 GAGTACGTTTCCGAATGGACATTTTCCATCATGATTTGGAAGCCGTAAAAACA-GCGGGC 1323590 Query 160274 TCCAGATAC-TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332 | | | | || ||||| | | ||| | || | ||||| | || || | |||||| Sbjct 1323591 TTCTGCGGCTTGAACCTCGTTAGAGAAGCGTTCGACGAGATTCTCGTTGACTATCCCGTC 1323650 Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCT 160392 || ||| || ||||| |||| || || |||||||| || | |||| |||||||| | Sbjct 1323651 GGAGGCGGCGAAGAAGGCCAGAACATGCGAGATGAAGTGGCGTTCGTTGTTGTTGAGACG 1323710 Query 160393 CTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGC 160452 | | ||| | | ||| ||| | | || |||||||| || |||| || || Sbjct 1323711 TTGGTGCCAATCCACGAGGTCGTGGCCGAGGTCCACCTCTTCGGCCGTCCAGAAGGAGGC 1323770 Query 160453 CTGAGCAGTTTTGTACAT 160470 || ||||| |||||||| Sbjct 1323771 CTCGGCAGTCTTGTACAT 1323788 Score = 122 bits (134), Expect = 1e-22 Identities = 175/247 (71%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || ||||| || |||||| ||||| |||||||| || ||| |||||||| || Sbjct 1325676 AAGAGCAGGCAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGCTGATCAACTCGTTCGAG 1325617 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | |||| || ||||||| |||||| |||||||| || |||| ||| || | || Sbjct 1325616 AAGGTGAGACCAGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCA 1325557 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || || || ||||| ||||| || || || || || | ||| | || || | || Sbjct 1325556 GAGAAGAAAATACCCTCGACGGCAGCGAAGGCGACAAGACGTTCAGCGAACGAAGACTTC 1325497 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153 |||| | |||||| |||||| ||||||||||| |||||| || ||| |||| Sbjct 1325496 TTGTCGGAGATCCACCGGAGGGCCCAGTCAGCCTTCTTCTTGATGCAAGGGATGGTCTCG 1325437 Query 160154 ACGGCGT 160160 || |||| Sbjct 1325436 ACCGCGT 1325430 >seq8 Length=1462401 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 203842 GTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGT 203901 ||| ||||||||||| || || | | ||||| | | | || |||||||||||||| Sbjct 1396890 GTCGACCGTGAACTGGATAGCCTGAGCAGCAGGGCGCGTGCGGAGGTAGTACATGCCGGT 1396831 Query 203902 CTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC-GTTGGGGT 203960 ||| || ||||||| ||| ||||| | |||||| | || | | |||| || |||| Sbjct 1396830 CTTCAGACCCTTCTTCCAGCCGTAGAAGTGCATACTCGTGAGCTGGTTCACGGTCGGGGA 1396771 Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCC 204019 | | || ||| | ||||| |||||| ||| ||| |||||||| || || ||||| Sbjct 1396770 CTG-CAGGTGCACGTTCAAGCTCTGGCTCTGGCAAATG-AAGGCGCCACGGTCCGCGGCA 1396713 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 | | || | ||||||| || |||||||| || |||||| Sbjct 1396712 AGCTCGAGGACCTTCTTCTGTGAGATCTCCCAAACGGTCTTG 1396671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150150764480