Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq4 147 5e-30 seq1 127 5e-24 >seq4 Length=1918071 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||||||||||||||| |||| ||||||||| | ||| || | |||||| Sbjct 1158207 AGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTGCGCCCATCT 1158266 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||||||||| |||||||||||||| || || ||| || || || || Sbjct 1158267 TCCAACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGGAGGGATACCCTCCTTGTCT 1158326 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| ||| |||| |||||| | | ||||| || | ||||| ||| Sbjct 1158327 TGGATCTTTGCCTTAACGTTGTCGATGGTGTCGGACGACTCTACCTCAAGGGTGATGGTC 1158386 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || ||||| Sbjct 1158387 TTGCCGGTAAGCGTCTTGACGAAGATTTG 1158415 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||| |||||||||||||| || | ||||||||||| | || Sbjct 1158426 CGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTA 1158485 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || |||||||| | || |||||||| || ||| || Sbjct 1158486 CGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTCGGGGGGAATGCCC 1158545 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| |||| |||||| | | || || || | | Sbjct 1158546 TCCTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGC 1158605 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || |||||||| || || Sbjct 1158606 GTGATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTG 1158643 Score = 118 bits (130), Expect = 2e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| ||||| || |||||||| |||| |||||| || | || || | || || || | Sbjct 1157983 CAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTCGA 1158042 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || |||||||| ||||||||||| ||||| ||| ||||| || |||| Sbjct 1158043 GCTGCTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTGAA 1158102 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| ||| |||| ||||| | | ||| || || | ||||||||||| | Sbjct 1158103 TCTTCGCCTTTACGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTTTC 1158162 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 |||| | || || || || || || Sbjct 1158163 CCGTCAACGTCTTGACGAAGATCTG 1158187 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 |||||| || | ||||||||| | | || | ||||||||| || |||||||||||||| Sbjct 1157720 CTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCATCTTCGAGTTGCTTTCCGGCGAA 1157779 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 |||||| ||||||||||| || || || || ||||| ||||| ||||||| Sbjct 1157780 GATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 1157839 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || | ||||| | | || || || | ||||| ||||| || ||||| || || || Sbjct 1157840 GTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCTTTCCGGTGAGGGTCTTGAC 1157899 Query 199618 AAAAATTTG 199626 || || || Sbjct 1157900 GAAGATCTG 1157908 Score = 98.7 bits (108), Expect = 2e-15 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||||||||| || |||||||| |||| ||||||||| | | ||| | || ||||| | Sbjct 1158725 CAAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCTTCGA 1158784 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||| ||||||||||| || ||||||||||| || Sbjct 1158785 GCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGG 1158821 Score = 93.3 bits (102), Expect = 1e-13 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || ||||| ||||||||||||||||||||||| | || ||| |||| |||||| ||||| Sbjct 1158292 CTCATCTTTGCCGGAAAGCAGTTGGAAGATGGGCGCACGTTGTCCGACTACAACATCCAG 1158233 Query 200995 AAAGAGTCTACTCTTCACCTTGTT 201018 || ||||| ||||| || |||||| Sbjct 1158232 AAGGAGTCGACTCTCCATCTTGTT 1158209 >seq1 Length=3319996 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 |||||||||||||||||||| |||| ||||||||| | | || | ||||| |||||| Sbjct 2718823 AGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGC 2718882 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || |||||||| || |||||||| |||||| || || || || || ||| Sbjct 2718883 TGCTTCCCCGCGAAGATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATC 2718942 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||||||| |||| ||| || | | || || || | |||||| ||||| || Sbjct 2718943 TTCGCCTTCACGTTGTCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCG 2719002 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || Sbjct 2719003 GTAAGAGTCTTGACGAAGATCTG 2719025 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| ||||| |||||||| |||| |||||| || | | || Sbjct 2719036 CGAAGACGGAGGACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAGAGGGTG 2719095 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || || ||||| ||||| ||||| || ||||||||||| || ||| || Sbjct 2719096 CGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCC 2719155 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| |||||| ||||||| |||| ||||| | | || || || | Sbjct 2719156 TCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGA 2719215 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| ||||| || || || || || || || Sbjct 2719216 GTGATCGTCTTGCCCGTAAGGGTCTTGACGAAGATCTG 2719253 Score = 122 bits (134), Expect = 2e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| || || || |||||| |||| ||| ||||| | | ||| | ||||| || | Sbjct 2718543 CAAGATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGA 2718602 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || ||||||||||||||||||||||| || || || || ||||||| Sbjct 2718603 GCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGAA 2718662 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||||||| |||| |||||| | | || || ||||| ||||| ||||| | Sbjct 2718663 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGC 2718722 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| || || || || || || Sbjct 2718723 CGGTGAGGGTCTTGACGAAGATCTG 2718747 Score = 95.1 bits (104), Expect = 3e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || || || || ||||| |||| ||||||||| | || |||| ||||| Sbjct 2719273 AGGACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCATCC 2719332 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || ||||||||||| ||||||||||| || |||||||| ||| Sbjct 2719333 TCAAGCTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCGGGA 2719374 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || ||||||||||| |||| ||||||||| || || | |||||| Sbjct 391472 AGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGTCCATCC 391413 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || || ||||| || ||||||||||| || Sbjct 391412 TCGAGCTGCTTGCCAGCAAAGATAAGGCGCTGCTGGTCTGG 391372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178913926694036