Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4 141 1e-28 seq1 136 4e-27 seq11 104 3e-17 >seq4 Length=1918071 Score = 141 bits (156), Expect = 1e-28 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| |||| ||||||||||| || || ||||||||||| || ||||| | Sbjct 1157696 ACGAAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCC 1157755 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || ||||| ||||| |||||||| || | |||||||||||||| ||| | | |||||| Sbjct 1157756 ATCTTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTT 1157815 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||||| ||| | ||| | | | ||||||| || || || || | |||| Sbjct 1157816 GTCCTGGATCTTCGCCTTCA-CGTTGTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGA 1157874 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || || || || || || ||||| ||||| Sbjct 1157875 TAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1157911 Score = 134 bits (148), Expect = 2e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || || || || | || |||||||||||||| ||||| Sbjct 1158455 CTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAA 1158514 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||||||| |||||||||| || | || |||||||||| |||||| ||||| ||| Sbjct 1158515 GATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGA-CGT 1158573 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||| || ||||| |||| || || | Sbjct 1158574 TGTCGATGGTGTCGGAGGACTCGACTTCGAGCGTGATAGTCTTGCCAGTCAAGGTCTTCA 1158633 Query 46581 CAAAGATTTGCAT 46593 ||||||| ||||| Sbjct 1158634 CAAAGATCTGCAT 1158646 Score = 118 bits (130), Expect = 1e-21 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || || ||||| |||| ||||||||||| || ||||| Sbjct 1157999 CTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 1158058 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | || |||||||| |||||| ||| | ||| Sbjct 1158059 GATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTGAATCTTCGCCTTTA-CGT 1158117 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| |||||| || || | ||||| || || ||||||| ||| || | Sbjct 1158118 TGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTTTCCCGTCAACGTCTTGA 1158177 Query 46581 CAAAGATTTGCATT 46594 | ||||| |||||| Sbjct 1158178 CGAAGATCTGCATT 1158191 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| | |||||| | || || | |||||| ||||| || Sbjct 1158227 CTCCTTCTGGATGTTGTAGTCGGACAACGTGCGCCCATCTTCCAACTGCTTTCCGGCAAA 1158286 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||| || |||| || | | ||||||||| |||||| | | | | ||| Sbjct 1158287 GATGAGACGCTGTTGATCGGGAGGGATACCCTCCTTGTCTTGGATCTT-TGCCTTAACGT 1158345 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| || || || | |||||||| ||||| || ||||| || | Sbjct 1158346 TGTCGATGGTGTCGGACGACTCTACCTCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGA 1158405 Query 46581 CAAAGATTTGCAT 46593 | ||||||||||| Sbjct 1158406 CGAAGATTTGCAT 1158418 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || ||||| || |||| |||||||||||||||||||| Sbjct 1158741 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCTTCGAGCTGCTTGCCGGCGAA 1158800 Query 46462 TATCAAGCGCTGCTGGTC 46479 || | |||||||||||| Sbjct 1158801 GATTAGGCGCTGCTGGTC 1158818 >seq1 Length=3319996 Score = 136 bits (150), Expect = 4e-27 Identities = 156/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 ||||||| || |||||||| ||||| || |||||||| |||||||| | || |||||| Sbjct 2718545 AGATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGC 2718604 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507 |||||||| ||||| || | ||||||||||||| || | | |||||| ||| ||| Sbjct 2718605 TGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGAATC 2718664 Query 46508 TTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCC 46566 ||| ||| | ||| | | | ||||| || ||||| |||| |||||||| ||||| Sbjct 2718665 TTCGCCTTCA-CGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCC 2718723 Query 46567 CGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || ||||| ||||| Sbjct 2718724 GGTGAGGGTCTTGACGAAGATCTGCAT 2718750 Score = 129 bits (142), Expect = 7e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| || ||||| |||| ||||| ||||||||||| || Sbjct 2719065 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAA 2719124 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||||| || | || |||||||||| |||||| ||| | ||| Sbjct 2719125 GATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCA-CGT 2719183 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | ||||| || |||||||| || || || | Sbjct 2719184 TGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTGA 2719243 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 2719244 CGAAGATCTGCAT 2719256 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || || || | || || |||||||| || ||||| Sbjct 2718837 CTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGCTGCTTCCCCGCGAA 2718896 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||| || | || | | ||||||||| ||||||| ||| | ||| Sbjct 2718897 GATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTTCGCCTTCA-CGT 2718955 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| ||| || || || | ||||||||| ||||| || || || || | Sbjct 2718956 TGTCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTAAGAGTCTTGA 2719015 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 2719016 CGAAGATCTGCAT 2719028 >seq11 Length=1123092 Score = 104 bits (114), Expect = 3e-17 Identities = 77/90 (86%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| |||||||| |||| |||||||||||||||||||| Sbjct 313812 CTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 313753 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCT 46491 ||||||||||||||||| | ||| | ||| Sbjct 313752 GATCAAGCGCTGCTGGTCAGGCGGGATGCT 313723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234810736160