Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 113 6e-20 seq8 86.0 8e-12 >seq5 Length=1807594 Score = 113 bits (124), Expect = 6e-20 Identities = 167/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 102085 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTA 102144 |||| ||||| || || || | || | || || || | ||||| || || ||||| Sbjct 1325418 AGCACCTCTTCGACGCGGTCGAGACCATCCCTTGCATCAAGAAGAAGGCTGACTGGGCCC 1325477 Query 102145 TGAAGTGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 102201 | |||| | || | ||||| ||| || ||||| || || |||| || || Sbjct 1325478 TCCGGTGGATCTCCGACAAGAAGTC---TTCGTTCGCTGAACGTCTTGTCGCCTTCGCTG 1325534 Query 102202 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGA 102260 || |||||||| ||||||||||| |||||| ||| | || | |||||||||||||| Sbjct 1325535 CCGTCGAGGGTATTTTCTTCTCTGGCTCCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGT 1325593 Query 102261 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 || |||||||| |||||| |||||| |||||| | ||| ||||||||||| Sbjct 1325594 GGACTCATGCCTGGTCTCACCTTCTCGAACGAGTTGATCAGCCGTGACGAGGG 1325646 >seq8 Length=1462401 Score = 86.0 bits (94), Expect = 8e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056 || |||| ||||| | ||||||||||| || |||||| |||||| |||| ||||| Sbjct 1395355 CTTTCGCCATCTATATCGAGCCATGGCATGCCGATATCTACGAGTTCATTGATTTGCGCA 1395414 Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116 ||||| || | ||||| | || |||||| | |||| |||||||||||| || | Sbjct 1395415 AAAACCACGGCAAGGAGGAAGTTCGCGCGCGCGATTTGTTCTACGCTCTCTGGATCCCTG 1395474 Query 112117 ATCTCTT 112123 ||||||| Sbjct 1395475 ATCTCTT 1395481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738458285760