Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq42 84.2 3e-11 seq8 82.4 9e-11 >seq42 Length=219827 Score = 84.2 bits (92), Expect = 3e-11 Identities = 223/330 (68%), Gaps = 23/330 (7%) Strand=Plus/Plus Query 167358 ACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAAA 167417 ||| |||||||||||||||| ||| || || | | ||| || || | |||||||| | Sbjct 64810 ACCAGTACCAATACCTTCAGCACCATTGACGAGGATCATGGGGAGGATGGGCATGTACCA 64869 Query 167418 GTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAGAATGGCATCATCTTTGGG 167477 || || || ||| | |||||| | | ||||||||||| | |||||| || Sbjct 64870 CTCAGGCTCGATGTCAGCCGTATCATCCTTGAGGTAGTTGAGAAGAGGATCATCGCCTGG 64929 Query 167478 ATCGAAGAGCTTTCGAGCCTCCTTGGTAAGC---TTC-GTAAAGATGTACCTCGTCTGAG 167533 || ||||||| |||| ||| |||| ||| || || || ||||||| | ||| Sbjct 64930 ATGGAAGAGCACGCGAG--ATATTG--AAGCCGGTTCGGTGAAAATATACCTCG-CGGAG 64984 Query 167534 ACGCA---TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGAT 167590 ||| || ||||||||| | ||| ||||| |||||||| |||| ||| || | Sbjct 64985 --GCATGGTCTTTGCCACCCTGGTCGCGAGTACCGAATTGACCGTTTGGCATGAGTAGGT 65042 Query 167591 TGATGTTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGCGAGGGAAA 167650 | | ||| || || | || || | ||||| |||||||| || || | ||| Sbjct 65043 TTAGGTTGTTGCTGCCGATGTAGTCTTGCGCCAAATTGACGATAGT---CGCCA-TCAAA 65098 Query 167651 CT----TCGCCGTGGTGGTAAGCACTCTTT 167676 || ||||||||||||| |||| |||| Sbjct 65099 CTCTGCTCGCCGTGGTGGT-AGCAGGCTTT 65127 >seq8 Length=1462401 Score = 82.4 bits (90), Expect = 9e-11 Identities = 177/265 (67%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 |||| || |||| |||||| | | ||||| || || || ||| || || |||| Sbjct 1395189 TGGCGCGGATGTTGTGGATGTTGAGGCCAATGCCGCCAGCAGTCTTGCTGATCATGGCAC 1395130 Query 110921 ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGC 110980 | | |||| ||| | || ||||| || || || || |||| | | || |||| Sbjct 1395129 AGTTCTTGAGAGTATCGTAGATACCTTCGATGGAGTCATCCTTCATACATACAAGGAAGC 1395070 Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040 | || | ||||||| |||| ||||| || |||||||| || |||| ||| || ||| Sbjct 1395069 ATGAGCTGAGCTGAGGATGAGGTGTTCCGGCGTTGAAGAGGGTGGGTGACGCGTGGGTGA 1395010 Query 111041 ACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAA 111100 | | ||||||||| | ||| || |||| || | | ||| |||||||||| Sbjct 1395009 AGTAGCGTTGGGACATAAGTTGGTAGGTTTCGATGGCCCGGTCGATATCGTTACCGTGAA 1394950 Query 111101 TACCAATGGCAACTCGCATGAACAT 111125 | || | || || ||||| ||||| Sbjct 1394949 TGCCGACAGCCACACGCATCAACAT 1394925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972260002400