Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-19 seq1 98.7 6e-16 >seq4 Length=1918071 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || ||||||||||| ||||| || || | ||| |||| || Sbjct 1157703 ACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCATCTTCG 1157762 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || |||||||| || || || || |||||||| |||| | ||||||||||| Sbjct 1157763 AGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGG 1157822 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| || ||| | |||| || | ||| || || | || || || ||| Sbjct 1157823 ATCTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCTTT 1157882 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| ||||| || ||||||||||| Sbjct 1157883 CCGGTGAGGGTCTTGACGAAGATCTGCAT 1157911 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || ||| | || |||| || ||||| || || || || Sbjct 1158456 TCCTTCTGAATGTTGTAGTCAGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAG 1158515 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||||||||||| | || | ||||||||||| ||||||| |||||| Sbjct 1158516 ATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTG 1158575 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| || || || || || || | ||||||||| Sbjct 1158576 TCGATGGTGTCGGAGGACTCGACTTCGAGCGTGATAGTCTTGCCAGTCAAGGTCTTCACA 1158635 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 1158636 AAGATCTGCATA 1158647 >seq1 Length=3319996 Score = 98.7 bits (108), Expect = 6e-16 Identities = 153/215 (71%), Gaps = 9/215 (4%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | ||||| || ||||| ||||||||||| || || | || |||| || Sbjct 2718541 ACCAAGATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTC 2718600 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || || || |||||||| | || | |||||||| || Sbjct 2718601 GAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCCTG 2718660 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGG 34947 ||||||| || || | | ||||| | ||| | ||| || || | ||| |||| Sbjct 2718661 AATCTTCGCCTTCAC----GTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGG 2718716 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| ||||| || |||||||||||| Sbjct 2718717 TCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 2718751 Score = 86.0 bits (94), Expect = 4e-12 Identities = 138/197 (70%), Gaps = 10/197 (5%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | || |||| |||||||| || || || || Sbjct 2718838 TCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGCTGCTTCCCCGCGAAG 2718897 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG--- 34907 || || || ||||| || | || | ||||||||||| |||||| || ||| Sbjct 2718898 ATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTTCGCCTTCACGTTG 2718957 Query 34908 --GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 |||| ||||| || | ||| || || | || ||||| || || || ||||||| Sbjct 2718958 TCGATGGTATCG---GAC--GACTCGACCTCAAGCGTGATGGTCTTGCCGGTAAGAGTCT 2719012 Query 34966 TCACAAAGATCTGCATA 34982 | || |||||||||||| Sbjct 2719013 TGACGAAGATCTGCATA 2719029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631590112224