Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5 271 1e-67 >seq5 Length=1807594 Score = 271 bits (300), Expect = 1e-67 Identities = 394/556 (71%), Gaps = 3/556 (1%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||||| |||||| ||||| |||||| ||| ||||| |||||||| | | |||| |||| Sbjct 1325675 AGAGCAGGCAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGCTGATCAACTCGTTCGAGA 1325616 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || |||||||||||||| || | || ||||||||||| || | |||||| ||||||| Sbjct 1325615 AGGTGAGACCAGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCAG 1325556 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 ||||||| || ||||| || || ||||| ||| || | || |||| |||| |||| Sbjct 1325555 AGAAGAAAATACCCTCGACGGCAGCGAAGGCGACAAGACGTTCAGCGAACGAAGACTTCT 1325496 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| |||||||| || |||||||| ||||||||||||||||| || || ||||| | Sbjct 1325495 TGTCGGAGATCCACCGGAGGGCCCAGTCAGCCTTCTTCTTGATGCAAGGGATGGTCTCGA 1325436 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTG 48422 || |||||| | || | | | ||| | || || || || | Sbjct 1325435 CCGCGTCGAAGAGGTGCTCCCGTTGCTTGGGGTCTTTGATGTACGTGTCGATGAGGAGGG 1325376 Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482 ||| |||||||||| | ||||| || || ||||| || |||||| | |||| Sbjct 1325375 AGTATGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAGCCATAGAAGCAGCGAGCCT 1325316 Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 | |||| ||||| | ||||| | ||| | || ||||| ||||| || || || | Sbjct 1325315 CGGCGGCCTGAACTTCGTTAGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCGG 1325256 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---G 48599 | || || ||||||||||||||||| | ||| |||||||| |||| | ||||| | Sbjct 1325255 AGGCTGCGAAGAAGGCAAGGACATGGGAGACGAAGTGGCGCTCATTGTCGTTGAGACGCG 1325196 Query 48600 CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGA 48659 |||||| | || | || ||| ||||||| || ||| | |||||||| || || Sbjct 1325195 TGTTCCAGTCGTGGAGATCCTTGGAGAGGTCCATCTCCTCCGCGGTCCAGAAAGAGGCCT 1325136 Query 48660 GTGCTTTTTTGTACAT 48675 || || |||||||| Sbjct 1325135 CAGCCTTCTTGTACAT 1325120 Score = 212 bits (234), Expect = 1e-49 Identities = 382/557 (69%), Gaps = 5/557 (1%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | ||||||||||||| |||||| |||||||| || ||||| || |||| || | Sbjct 1323233 AGAGGAGGCAGGCAAAGTCCGTGTGCATTCCTTCGTCTCGACTGATCAGTTCGTTTGAAA 1323292 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || || || ||||| | || | | || |||||||| ||||| ||||| || || | Sbjct 1323293 AGGTCAGGCCTGGCATTAAGCCGCGTTTCTTCAGCCAGAATATTGCGGCGAAGGACCCGG 1323352 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 ||||||| ||||| || || ||| ||||| || | ||| |||| || | | | Sbjct 1323353 AGAAGAATATGCCTTCGACGCACGCAAACGCCACCAGGCGCTCGGCGAAGGAGGATCTTT 1323412 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| ||||||||| || ||||| ||||| ||||| |||||||| |||| || || | Sbjct 1323413 TGTCAGAGATCCAGCGGAGGGCCCAATCTGCTTTCTTTTTGATGCACGGCACGGTGTCGA 1323472 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTG 48422 |||| ||| || | | ||| | ||| | ||| ||| | ||| || Sbjct 1323473 TGGCATTGAACAGGCGGTCCCGCTCTTGGGTGTCTTTGATATATGTATCAATCAGGAGTG 1323532 Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482 |||| | || || || ||||| || || ||| ||||| ||||| || | ||| | Sbjct 1323533 AGTACGTTTCCGAATGGACATTTTCCATCATGATTTGGAAGCCGTAAAAACAGCGGGCTT 1323592 Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 | | || || || | ||||| | || | |||||||| ||||||||||| || | Sbjct 1323593 CTGCGGCTTGAACCTCGTTAGAGAAGCGTTCGACGAGATTCTCGTTGACTATCCCGTCGG 1323652 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602 | || || |||||||| || ||||| | ||| ||||| ||||||| | ||||| | | Sbjct 1323653 AGGCGGCGAAGAAGGCCAGAACATGCGAGATGAAGTGGCGTTCGTTGTTGTTGAGA-CGT 1323711 Query 48603 T----CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCG 48658 | ||| || | ||| | ||| |||||||| ||||| | ||||||||||| || Sbjct 1323712 TGGTGCCAATCCACGAGGTCGTGGCCGAGGTCCACCTCTTCGGCCGTCCAGAAGGAGGCC 1323771 Query 48659 AGTGCTTTTTTGTACAT 48675 || | |||||||| Sbjct 1323772 TCGGCAGTCTTGTACAT 1323788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526884766720