Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 118 1e-21 seq42 104 3e-17 seq8 82.4 9e-11 >seq5 Length=1807594 Score = 118 bits (130), Expect = 1e-21 Identities = 124/163 (76%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 |||||||||||||||||| | ||||||||||| || || || || |||||||||||||| Sbjct 1323405 CTCCTTCGCCGAGCGCCTGGTGGCGTTTGCGTGCGTCGAAGGCATATTCTTCTCCGGGTC 1323346 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 ||| ||| || | ||| ||||||| || || | ||||||||||| ||| ||||| Sbjct 1323345 CTTCGCCGCAATATTCTGGCTGAAGAAACGCGGCTTAATGCCAGGCCTGACCTTTTCAAA 1323286 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 ||||| || ||||| || || | ||| ||| |||||| Sbjct 1323285 CGAACTGATCAGTCGAGACGAAGGAATGCACACGGACTTTGCC 1323243 >seq42 Length=219827 Score = 104 bits (114), Expect = 3e-17 Identities = 203/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 13559 CCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAGTGTACTCTCATT 13618 || ||||||| || |||||||| || ||||| | || | | | | ||||||||||| Sbjct 66292 CCGAAGTTGGCCGATGCGAACAACGCTGGTACACGAAAAGCGGCAGATTGTACTCTCATC 66233 Query 13619 GTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGT 13678 |||| || || || || || || | || || | || |||||| |||| | || ||| Sbjct 66232 CTCACGGAAGGAGACTCCGCCAAGTCTCTAGCTATCGCTGGTCTCAGTGTCATCGGGCGT 66173 Query 13679 GATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGGACGCTTCGGTG 13738 || |||| || |||||||| ||||| |||||| || ||||| ||||| | Sbjct 66172 GACAACTATGGCGTGTTCCCCCTTCGTGGTAAACTACTCAACGTTCGTGACGCCAAGCAT 66113 Query 13739 GCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCTTGGTCTTCAACAA 13798 | || ||| || ||||| || | || ||||||||||||| ||||| ||||| Sbjct 66112 GACCAAATCATGAAGAATGAGGAGATCCAGAATATCAAGAAGATCCTCGGTCTACAACAC 66053 Query 13799 GGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGATTATGACAGAT 13858 || ||||| ||| || || || ||||||| || ||||| ||||| ||| Sbjct 66052 AACAAGGACTATAGGGATACGAAAGACCTGCGATATGGTCAACTAATGATCATGACTGAT 65993 >seq8 Length=1462401 Score = 82.4 bits (90), Expect = 9e-11 Identities = 174/260 (67%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||||| ||||| || || ||||||| ||||| | || || || | | Sbjct 1394916 CCCCAGCACATGTTGATGCGTGTGGCTGTCGGCATTCACGGTAACGATATCGACCGGGCC 1394975 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | || || ||| | ||||||||| | |||| ||||| |||| ||||||||| Sbjct 1394976 ATCGAAACCTACCAACTTATGTCCCAACGCTACTTCACCCACGCGTCACCCACCCTCTTC 1395035 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || || || ||||| || ||| | | ||||||||| | | ||||| ||| Sbjct 1395036 AACGCCGGAACACCTCATCCTCAGCTCAGCTCATGCTTCCTTGTATGTATGAAGGATGAC 1395095 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || ||| | |||||||| | ||||| | | | ||||| ||| ||| ||||| Sbjct 1395096 TCCATCGAAGGTATCTACGATACTCTCAAGAACTGTGCCATGATCAGCAAGACTGCTGGC 1395155 Query 75452 GGTATTGGGATGCACATCCA 75471 || ||||| | ||||||| Sbjct 1395156 GGCATTGGCCTCAACATCCA 1395175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565811783040