Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5 156 5e-32 seq42 100 3e-15 seq3 96.9 4e-14 >seq5 Length=1807594 Score = 156 bits (172), Expect = 5e-32 Identities = 151/194 (78%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||||| ||| || || ||| |||||| |||||||||||||||| |||||||||| Sbjct 1326013 GCCTTGGAGTAATCTGAGACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATC 1325954 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | ||| ||||||| ||||||| ||| ||| ||||| | || Sbjct 1325953 ATGTCCATGAAGTCGAAAGGGTTGGTGACCTTGTAGAACTTCTCGTCGCCGAGGGCAACG 1325894 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||| Sbjct 1325893 AGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCTTCGCGTTCATGCCAATG 1325834 Query 868871 AGCGCCACCGGCAG 868884 ||||| |||||| Sbjct 1325833 AGCGCGCACGGCAG 1325820 Score = 131 bits (144), Expect = 2e-24 Identities = 182/253 (72%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||| |||| || || || ||| |||||||||||||| | | ||||| ||| Sbjct 1323542 CCGAATGGACATTTTCCATCATGATTTGGAAGCCGTAAAAACAGCGGGCTTCTGCGGCTT 1323601 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| || ||| || || | || |||||| || || |||||| |||||||| Sbjct 1323602 GAACCTCGTTAGAGAAGCGTTCGACGAGATTCTCGTTGACTATCCCGTCGGAGGCGGCGA 1323661 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAG-CG--ACACCCAGT 869807 | || ||||| || ||| ||| |||||||| |||| || | |||| || ||| | Sbjct 1323662 AGAAGGCCAGAACATGCGAGATGAAGTGGCGTTCGTTGTTGTTGAGACGTTGGTGCCAAT 1323721 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 ||| |||| || |||||||||||| ||||| ||||||| ||||||||||| | | Sbjct 1323722 CCACGAGGTCGTGGCCGAGGTCCACCTCTTCGGCCGTCCAGAAGGAGGCCTCGGCAGTCT 1323781 Query 869868 TGTACATCTCCCA 869880 ||||||||| ||| Sbjct 1323782 TGTACATCTGCCA 1323794 Score = 129 bits (142), Expect = 7e-24 Identities = 204/288 (71%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||||||| ||||| |||| ||| || |||||||| || |||||| Sbjct 1325646 CCCTCGTCACGGCTGATCAACTCGTTCGAGAAGGTGAGACCAGGCATGAGTCCACGCTTC 1325587 Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 |||||||| ||||||| ||| ||| ||| ||||| || || ||||||||||| || || Sbjct 1325586 TTGAGCCAGAAGATGGACGC-GAAGGAGCCAGAGAAGAAAATACCCTCGACGGCAGCGAA 1325528 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | ||| || || || || || ||| | || ||||| ||||||| | || Sbjct 1325527 GGCGACAAGACGTTCAGCGAA-----CGAAG-ACTTCTTGTCGGAGATCCACCGGAGGGC 1325474 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 |||||| ||||| ||| | | | || | || |||| ||| |||||||| ||| Sbjct 1325473 CCAGTCAGCCTTCTTCTTGATGCAAGGGATGGTCTCGACCGCGTCGAAGAGGTGCTCCCG 1325414 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||||| |||| || |||||||| ||||| || || ||||| Sbjct 1325413 TTGCTTGGGGTCTTTGATGTACGTGTCGATGAGGAGGGAGTATGTCTC 1325366 Score = 118 bits (130), Expect = 1e-20 Identities = 200/288 (69%), Gaps = 9/288 (3%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 |||||||| |||||||||| |||||| ||||| ||||| ||||| | |||||| ||| Sbjct 1323262 CCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTCAGGCCTGGCATTAAGCCGCGTTTC 1323321 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || ||||| || || ||| ||| || ||||| || ||||| |||||| ||||| Sbjct 1323322 TTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAGAATATGCCTTCGACGCACGCAAAC 1323381 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGCC 869356 | | || |||||||| |||| ||| || |||| |||||| | ||| Sbjct 1323382 GCCACCAGGCGCTCGGCGAAGG-----AGGATCTT-TTGTCAGAGATCCAGCGGAGGGCC 1323435 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTT 869416 || || || || || | | ||||||| ||||||||||| || ||| ||||| Sbjct 1323436 CAATCTGCTTTCTTTTTGATGCACGGCACGGTGTCGATGGCATTGAACAGGCGGTCCCGC 1323495 Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || | ||| |||| ||| || || |||||||| || || || ||| Sbjct 1323496 TCTTGGGTGTCTTTGATATATGTATCAATCAGGAGTGAGTACGTTTCC 1323543 Score = 118 bits (130), Expect = 1e-20 Identities = 177/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || || |||||||| || ||| | |||| || | || Sbjct 1325364 GAGTGGATGTTCTCCATCATAATTTGGAAGCCATAGAAGCAGCGAGCCTCGGCGGCCTGA 1325305 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || || ||| || || | ||||||||| ||||| |||||| ||| ||||| Sbjct 1325304 ACTTCGTTAGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCTGCGAAG 1325245 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA---GCGACACCCAGTGG 869809 || || ||||| || || ||||||||||| | |||| ||| ||| ||||| | Sbjct 1325244 AAGGCAAGGACATGGGAGACGAAGTGGCGCTCATTGTCGTTGAGACGCGTGTTCCAGTCG 1325185 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | || | |||||||| |||||| |||||||||| |||||||| ||||| ||| Sbjct 1325184 TGGAGATCCTTGGAGAGGTCCATCTCCTCCGCGGTCCAGAAAGAGGCCTCAGCCTTCTTG 1325125 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 1325124 TACATTTGCCA 1325114 Score = 114 bits (126), Expect = 2e-19 Identities = 140/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 || ||| ||| ||| ||| ||||||||||||||||||| ||| || |||| |||||| Sbjct 1322901 TAGTCGGACACACGCTTCTCAAAAAAGTTGGTCTTGCCCTGGAGGGAAATCATGTCCATC 1322960 Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCA--TCCGAGCGACGCGAGCAGGC 868817 || ||| || |||| || | || ||| |||||| ||| ||||| | || |||| Sbjct 1322961 CATTCGAAGGGATTGGCGGTGTGATAATGC--TTCGCATTTCCAAGCGAAACCAGAAGGC 1323018 Query 868818 GGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCA 868877 | || ||||| || |||||||| |||| |||||| | ||||||| ||||| || | | Sbjct 1323019 GATCCGCGACGAATTCGATGTATTGGCGCATGAGAGTGACGTTCATACCGATAAGGCCGA 1323078 Query 868878 CCGGCAGCG 868886 | |||| || Sbjct 1323079 CTGGCAACG 1323087 >seq42 Length=219827 Score = 100 bits (110), Expect = 3e-15 Identities = 104/134 (78%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GT 19110 |||||||||||| ||||||||| | || || || | ||| | ||||| || || Sbjct 215610 CATCGGCGGCACCGTGACGTGCATCATCCGTGGTGTTCCCTCTGGCTTGGGCGAACCAGT 215669 Query 19111 GCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGG 19170 | || |||||| ||||||| |||||| ||||| |||||||| ||||| |||||||||| Sbjct 215670 G-TTCGACAAGCTCGAGGCGAAGCTCGCGCACGCTATGCTGTCCATCCCCGCCACCAAGG 215728 Query 19171 GATTCGAGATTGGC 19184 | |||||||| ||| Sbjct 215729 GCTTCGAGATCGGC 215742 >seq3 Length=2064430 Score = 96.9 bits (106), Expect = 4e-14 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 ||||| ||| | || || |||| || ||||||||||||||||||| || | ||| | | Sbjct 541572 GCCTCAGTGGCAATACGCTCGAAGATATCGTTGACAAACGAGTTCAAGATGGCCATAGCC 541631 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||| ||||| ||| ||| |||||||||||||||||||| Sbjct 541632 TTGTTCGAGATACCCGTGTCAGGGTGCACCTGCTTGAGCAC 541672 Score = 93.3 bits (102), Expect = 5e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||||| ||||||| |||| |||||||| ||||||||||| | || | ||||| | Sbjct 729917 GCCTCGGTTGCGATGCGCTCGAAGATGTCGTTAACAAACGAGTTGAGGATGGCCATCGCC 729858 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||||||||| || ||| ||||| |||||||| || || Sbjct 729857 TTGTTGGAGATACCAGTGTCAGGGTGGACCTGCTTCAGGAC 729817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107097511141036