Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq29 138 9e-28 seq4 82.4 6e-11 >seq29 Length=473663 Score = 138 bits (152), Expect = 9e-28 Identities = 187/261 (72%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 |||||| || ||||| ||||| | || || |||| ||| ||||| |||||| || Sbjct 92552 GATGAGGTCGGTCTCGGGGTTCTTGCAAGCCTTGCACAGCACGAACTTCTCGATGAAGCC 92493 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || || || || | | ||| | |||||| | |||||||||||| | || ||||| Sbjct 92492 GTCGAGGAGTTCGCGGAGCTTGGTTGCGTCGTGCGCGCCGTTGACGATATAGCGGTCGTT 92433 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 || | ||||| ||| |||||||| |||||||| |||||| |||| ||||| || | Sbjct 92432 CTTCTCATCGAAAGACGTCTGCGCGCCGAGCTCGCATCCGAAGAACTTGGTCGGATATGT 92373 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 | || || | || ||| ||||| |||| ||| ||| || ||| || |||||||| Sbjct 92372 CGGAGGGCGGCTCAGTGCCCGGGCGACGTCGGACATATTGGGGACGACTGTTTTGATGCC 92313 Query 34551 GTTGCCCTTTCCTTCGACCTT 34571 ||||| || ||||||| ||| Sbjct 92312 ATTGCCTTTGCCTTCGATCTT 92292 >seq4 Length=1918071 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || || ||||| || || || || || || || ||| | || || | Sbjct 1158191 AATGCAGATCTTCGTCAAGACGTTGACGGGAAAGACGATCACCCTTGAGGTCGAATCGTC 1158132 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| || ||| | | ||||| ||||||| ||||| |||||| | ||| |||||| Sbjct 1158131 CGACACGATCGACAACGTAAAGGCGAAGATTCAAGACAAGGAAGGCATTCCCCCGGATCA 1158072 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | ||||| | || ||||| ||||| ||||| | | | || || |||||||||| Sbjct 1158071 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGTCGGATTACAA 1158012 Query 110452 CATTCAAAAAGAATCTAC 110469 ||| || || || || || Sbjct 1158011 CATCCAGAAGGAGTCAAC 1157994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839043994444