Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq5 168 1e-35 seq3 96.9 5e-14 seq1 96.9 5e-14 >seq5 Length=1807594 Score = 168 bits (186), Expect = 1e-35 Identities = 238/332 (72%), Gaps = 13/332 (4%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || |||||||| ||||| ||| ||| || |||||||| || |||||| Sbjct 1325646 CCCTCGTCACGGCTGATCAACTCGTTCGAGAAGGTGAGACCAGGCATGAGTCCACGCTTC 1325587 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||| ||| ||||| || || ||||||||||| || ||| Sbjct 1325586 TTGAGCCAGAAGATGGACGCGAAGGAGCCAGAGAAGAAAATACCCTCGACGGCAGCGAAG 1325527 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT--TTGTTGATCCACTTCATCGCCC 794518 |||| || || || || || | | | | ||| | | ||||||| | |||| Sbjct 1325526 GCGACAAGACGTTCAGCGAA-----CGAAGACTTCTTGTCGGAGATCCACCGGAGGGCCC 1325472 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC---T 794575 | || ||||| ||| | | | || | || |||| ||| |||||||| ||| | Sbjct 1325471 AGTCAGCCTTCTTCTTGATGCAAGGGATGGTCTCGACCGCGTCGAAGAGGTGCTCCCGTT 1325412 Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635 || | ||||| |||| ||| |||||||||||||| ||||| ||||| |||||||||| Sbjct 1325411 GCTTG---GGGTCTTTGATGTACGTGTCGATGAGGAGGGAGTATGTCTCAGAGTGGATGT 1325355 Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 | || || || ||||||||||| |||||| Sbjct 1325354 TCTCCATCATAATTTGGAAGCCATAGAAGCAG 1325323 Score = 143 bits (158), Expect = 4e-28 Identities = 152/199 (76%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||||| || || || ||| |||||| |||||||||||||||| || Sbjct 1326021 TGACACCAGCCTTGGAGTAATCTGAGACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGA 1325962 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||||||| ||||| | ||| ||||||| | |||| ||||||| |||| Sbjct 1325961 GCGAGATCATGTCCATGAAGTCGAAAGGGTTGGTGACCTTGTAGAACTTCTCGTCGCCGA 1325902 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | |||||||||||||| ||||| || ||||||||||||||||| ||||||| Sbjct 1325901 GGGCAACGAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCTTCGCGTTCA 1325842 Query 794071 TGCCGATGAGCGC-CACGG 794088 |||| |||||||| ||||| Sbjct 1325841 TGCCAATGAGCGCGCACGG 1325823 Score = 140 bits (154), Expect = 5e-27 Identities = 230/330 (70%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| |||||||||| |||||| |||| ||||| ||||| | |||||| ||| Sbjct 1323262 CCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTCAGGCCTGGCATTAAGCCGCGTTTC 1323321 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || || || ||| || ||||| || ||||| |||||| ||||| Sbjct 1323322 TTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAGAATATGCCTTCGACGCACGCAAAC 1323381 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCATCGCC 794517 | || || |||||||| || | ||| || ||||| |||||| | ||| Sbjct 1323382 GCCACCAGGCGCTCGGCGAAGG-----AGGATCT-TTTGTCAGAGATCCAGCGGAGGGCC 1323435 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 || ||||| || || | | | ||||| ||||||||||| || ||| ||||| | Sbjct 1323436 CAATCTGCTTTCTTTTTGATGCACGGCACGGTGTCGATGGCATTGAACAGGCGGTCCCGC 1323495 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || | ||| |||| || || || || ||||| ||||| || || || |||| ||| Sbjct 1323496 TCTTGGGTGTCTTTGATATATGTATCAATCAGGAGTGAGTACGTTTCCGAATGGACATTT 1323555 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 || || ||| |||||||| ||||| ||| Sbjct 1323556 TCCATCATGATTTGGAAGCCGTAAAAACAG 1323585 Score = 127 bits (140), Expect = 3e-23 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 793907 ATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 793966 ||| ||| ||| ||| ||| ||||||||||||||||||| ||| || |||| ||||| Sbjct 1322900 ATAGTCGGACACACGCTTCTCAAAAAAGTTGGTCTTGCCCTGGAGGGAAATCATGTCCAT 1322959 Query 793967 CCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCG 794026 ||| ||| || ||||| || | || |||||| | || ||||| | || ||||| Sbjct 1322960 CCATTCGAAGGGATTGGCGGTGTGATAATGCTTCGCATTTCCAAGCGAAACCAGAAGGCG 1323019 Query 794027 GTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCAC 794086 || ||||||||||| ||||| |||| |||||| | | ||||||| ||||| || | || Sbjct 1323020 ATCCGCGACGAATTCGATGTATTGGCGCATGAGAGTGACGTTCATACCGATAAGGCCGAC 1323079 Query 794087 GGGCAGCG 794094 |||| || Sbjct 1323080 TGGCAACG 1323087 Score = 120 bits (132), Expect = 5e-21 Identities = 160/220 (73%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 796140 AAAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGC 796199 |||||| | ||| || | |||| ||||| || |||||| || | || ||||| Sbjct 1323579 AAAACAGCGGGCTTCTGCGGCTTGAACCTCGTTAGAGAAGCGTTCGACGAGATTCTCGTT 1323638 Query 796200 CACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTC 796259 || || |||||| ||||||||| ||||| || || ||| ||| ||||| || |||| Sbjct 1323639 GACTATCCCGTCGGAGGCGGCGAAGAAGGCCAGAACATGCGAGATGAAGTGGCGTTCGTT 1323698 Query 796260 GTCGCTGAG-CGA--GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGT 796316 || | |||| || | ||| | || |||| ||||||||| ||||| ||||| || Sbjct 1323699 GTTGTTGAGACGTTGGTGCCAATCCACGAGGTCGTGGCCGAGGTCCACCTCTTCGGCCGT 1323758 Query 796317 CCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||| |||||||||||||| | |||||||||| ||| ||| Sbjct 1323759 CCAGAAGGAGGCCTCGGCAGTCTTGTACATCTGCCAAATC 1323798 >seq3 Length=2064430 Score = 96.9 bits (106), Expect = 5e-14 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||| ||| | || || |||| || ||||||||||||||||||| ||| | ||| | Sbjct 541572 GCCTCAGTGGCAATACGCTCGAAGATATCGTTGACAAACGAGTTCAAGATGGCCATAGCC 541631 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| ||||| ||| ||| |||||||||||||||||||| Sbjct 541632 TTGTTCGAGATACCCGTGTCAGGGTGCACCTGCTTGAGCAC 541672 Score = 93.3 bits (102), Expect = 7e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 |||||||| ||||||| |||| |||||||| ||||||||||| | ||| | ||||| Sbjct 729917 GCCTCGGTTGCGATGCGCTCGAAGATGTCGTTAACAAACGAGTTGAGGATGGCCATCGCC 729858 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||||| || ||| ||||| |||||||| || || Sbjct 729857 TTGTTGGAGATACCAGTGTCAGGGTGGACCTGCTTCAGGAC 729817 Score = 86.0 bits (94), Expect = 1e-10 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 |||||| || | ||||||||| ||||||| ||||||| |||| ||||| ||| | | ||| Sbjct 730099 CTTGGTCACCGACTTGGTACCTTCTGAGATGGCGTGCTTGGCAAGTTCACCGGGGAGGAT 730040 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||||| || || ||||||||||| || Sbjct 730039 GAGGCGGACTGCAGTCTGGATCTCTCG 730013 >seq1 Length=3319996 Score = 96.9 bits (106), Expect = 5e-14 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 || || || ||||| |||||| | ||||||||||||| || ||| || | || | | Sbjct 955993 CTTCCACCAGGCCGGCACAAGATTGTCATCCTCGATGAAGCAGACAGCATGACCCCCGGC 956052 Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 || ||||| ||||| || ||| ||||| | | | | |||||||| ||||| ||||| Sbjct 956053 GCACAGCAAGCCCTGCGTCGGACAATGGAGATCTTCTCGAACACGACTCGGTTCGCGCTT 956112 Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374 || ||||||| ||| | | ||||||| | | || || || ||||| ||| |||| Sbjct 956113 GCTTGCAACATGTCAAACAAGATCATCGAGCCGATACAAAGTCGGTGCGCTATCCTGCGG 956172 Query 2019375 TTTGCGCGCCTCACCGAC 2019392 | ||| ||||| ||| Sbjct 956173 TACGCGAAGCTCACGGAC 956190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916192361723012