Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq4 104 2e-17 seq1 93.3 4e-14 >seq4 Length=1918071 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || || || ||||||||||| || |||| ||| ||||| || |||||| Sbjct 1157994 GTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTCGAGCTGCTTACCA 1158053 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||| ||||| |||||||| || || |||||||| ||||| ||| || ||| Sbjct 1158054 GCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTGAATCTTCGCCTTT 1158113 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | |||||| | | ||| || |||| || | |||||| || ||||| || Sbjct 1158114 ACGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTTTCCCGTCAACGTC 1158173 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 1158174 TTGACGAAGATCTGCAT 1158190 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||| | ||| | || || || || || |||||||| ||| | Sbjct 1158192 CCACCACGGAGACGGAGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1158251 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| | ||||| | || || || ||| |||| ||||| || ||||||||||| Sbjct 1158252 AACGTGCGCCCATCTTCCAACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGGAGGG 1158311 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || ||||| || ||| || | | || | ||||| | | ||||| Sbjct 1158312 ATACCCTCCTTGTCTTGGATCTTTGCCTTAACGTTGTCGATGGTGTCGGACGACTCTACC 1158371 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| || | ||||||||||| | || || ||||| ||||||||| Sbjct 1158372 TCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGACGAAGATTTGCATA 1158419 >seq1 Length=3319996 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268 |||| ||||| || || || |||||||||||| | |||| ||| |||||||| Sbjct 2719054 TGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTGC 2719113 Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 137328 || || ||| |||| || || ||||| ||||| || ||||| || ||||| || ||| Sbjct 2719114 TTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTT 2719173 Query 137329 TGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 137388 || | | || | |||||| | | || ||||| | ||| | ||||||||| || Sbjct 2719174 GCCTTCACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGTA 2719233 Query 137389 AATGTTTTTACGAATATTTGCATA 137412 | || || ||||| || |||||| Sbjct 2719234 AGGGTCTTGACGAAGATCTGCATA 2719257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488540897745600