Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq4 114 1e-20 seq5 98.7 1e-15 seq8 87.8 2e-12 >seq1 Length=3319996 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||||||| | ||||| |||||||||||||| ||||| || ||||| Sbjct 2718596 TCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTA 2718655 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||| | | || | ||||| | | |||||| || | ||||| | Sbjct 2718656 TCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATG 2718715 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| || || || ||||| |||||||| Sbjct 2718716 GTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2718750 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||||||| | ||| ||||||||| |||||||| Sbjct 2719060 GTAGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 2719119 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || || |||||||||||||| || ||||| |||||||| ||||||| ||| Sbjct 2719120 GCAAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTC 2719179 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 2719180 ACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGTAAGGGTC 2719239 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 2719240 TTGACGAAGATCTGCAT 2719256 >seq4 Length=1918071 Score = 114 bits (126), Expect = 1e-20 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| ||| | |||| | | | || ||||| ||||| || ||| Sbjct 1157720 CTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCA-TCTTCGAGTTGCTTTCCGGCGA 1157778 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | ||||| |||||||||||||| ||||| || |||||||| |||||| ||| | | Sbjct 1157779 AGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACGT 1157838 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| |||||||| | ||| || || | |||| || || ||||| || || || | Sbjct 1157839 TGTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCTTTCCGGTGAGGGTCTTGA 1157898 Query 133648 CGAAAATCTGCATGGCT 133664 |||| ||||||||| || Sbjct 1157899 CGAAGATCTGCATGCCT 1157915 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| ||| || |||| | || || | |||||| || Sbjct 1158222 GTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTGCGCCCATCTTCCAACTGCTTTCCG 1158281 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||| ||||| || ||||||||||| || |||||||| ||||||| ||| Sbjct 1158282 GCAAAGATGAGACGCTGTTGATCGGGAGGGATACCCTCCTTGTCTTGGATCTTTGCCTTA 1158341 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | ||| || || | ||||| ||| |||||||| || || Sbjct 1158342 ACGTTGTCGATGGTGTCGGACGACTCTACCTCAAGGGTGATGGTCTTGCCGGTAAGCGTC 1158401 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 1158402 TTGACGAAGATTTGCAT 1158418 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| || |||||||| || ||| |||||||||||| Sbjct 1157987 ATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTCGAGCTG 1158046 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || ||| | || || |||||||| || || || |||||||||||||| ||||| Sbjct 1158047 CTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTGAATCTT 1158106 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | |||||||| | || || || | ||||| || || || || Sbjct 1158107 CGCCTTTACGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTTTCCCGT 1158166 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| |||||||| Sbjct 1158167 CAACGTCTTGACGAAGATCTGCAT 1158190 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| ||| | || | || ||||||||||| || ||||| |||||| Sbjct 1158492 TCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1158551 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | ||||||| || ||| || |||| |||| Sbjct 1158552 TCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGCGTGATA 1158611 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| |||| || || || || |||||||| Sbjct 1158612 GTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1158646 >seq5 Length=1807594 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||||| |||||||||||||||| || ||||| || ||||| ||||| ||| ||| Sbjct 1323238 AGGCAGGCAAAGTCCGTGTGCATTCCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTC 1323297 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 ||||| ||||| | ||| |||| | ||||||| ||||| ||| || || ||| Sbjct 1323298 AGGCCTGGCATTAAGCCGCGTTTCTTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAG 1323357 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAA 120803 || | ||| || ||| ||||| || |||| ||||||||| || Sbjct 1323358 AATATGCCTTCGACGCACGCAAACGCCACCAGGCGCTCGGCGAA 1323401 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 120363 GACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAA 120422 ||| || ||||| || ||||| || ||||||| | ||| || ||| ||| || ||||| Sbjct 1325996 GACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAA 1325937 Query 120423 CGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTAC 120482 |||||| | | || || | ||| | ||| | |||||||| ||||| || || Sbjct 1325936 AGGGTTGGTGACCTTGTAGAACTTCTCGTCGCCGAGGGCAACGAGCAGGCGGTCGGCCAC 1325877 Query 120483 AAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCC 120521 ||||| ||||||| ||||||| || |||||||||||| Sbjct 1325876 GAACTCGATGTACTGGCACATGAGCTTCGCGTTCATGCC 1325838 >seq8 Length=1462401 Score = 87.8 bits (96), Expect = 2e-12 Identities = 177/260 (68%), Gaps = 12/260 (5%) Strand=Plus/Minus Query 147939 GCAGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAG 147998 ||||| || | ||||| || ||||||||||| ||||| || ||| | ||| ||||| Sbjct 1396865 GCAGCAGGGCGCGTGCGGAGGTAGTACATGCCGGTCTTCAGACCCTTCTTCCAGCCGTAG 1396806 Query 147999 TCGTGCACCGACGACATGAGCGTGTAC---GTCGGGTGCGGCACAAACAGATTAAACGAC 148055 ||||| || ||||| || | |||||| | ||| || || || | Sbjct 1396805 AAGTGCATACTCG---TGAGCTGGTTCACGGTCGGGGACTGCAGGTGCACGTTCAAGCTC 1396749 Query 148056 TGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCT-- 148113 ||||||||| |||||| ||||||||||| ||||| | || ||| ||| ||| Sbjct 1396748 TGGCTCTGGCAAATGAAGGCGCCACGGTCCGCGGCAAGCTC---GAGGACCTTCTTCTGT 1396692 Query 148114 -TCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGC 148172 |||||||| | |||||||| | | ||||| || ||||| ||||||| ||||| Sbjct 1396691 GAGATCTCCCAAACGGTCTTGTAGATCGCCTTGACATCCTCGGGTATGCCGTTGATGCTT 1396632 Query 148173 TGCACCGAGCCGCGGTGCGC 148192 || | |||||| || ||| Sbjct 1396631 TGGATAGAGCCGTTGTTCGC 1396612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417730277920