Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq4 109 4e-19 seq1 93.3 3e-14 >seq4 Length=1918071 Score = 109 bits (120), Expect = 4e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | |||||| || || || ||||| || || |||||||| |||||||| |||||| | Sbjct 1157696 ACGAAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCC 1157755 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || || | ||| |||||||| || || | |||||||| || |||| | ||| || || Sbjct 1157756 ATCTTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTT 1157815 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || ||| |||| | | |||| |||||| || || || |||| |||| Sbjct 1157816 GTCCTGGATCTTCGCCTTCA-CGTTGTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGA 1157874 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || | || || || ||||||||||| Sbjct 1157875 TAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1157911 Score = 100 bits (110), Expect = 2e-16 Identities = 151/211 (72%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 33541 ACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || || ||| || || ||||||||||| || || ||||| |||| || Sbjct 1157981 ACCAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTC 1158040 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | || || || || || || | |||||||||||| | || | ||||| ||||| Sbjct 1158041 GAGCTGCTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTG 1158100 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| ||| | | || | ||| | |||||| ||||| || |||| |||||||| | Sbjct 1158101 AATCTTC-GCCTTTACGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCT 1158159 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || ||||| || || ||||||||||| Sbjct 1158160 TTCCCGTCAACGTCTTGACGAAGATCTGCAT 1158190 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | || | ||| ||||| ||| || || |||||||| ||||| Sbjct 1158192 CCACCACGGAGACGGAGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1158251 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| | || ||||| || ||||||||||| || | |||||| ||||| | || Sbjct 1158252 AACGTGCGCCCATCTTCCAACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGGAGGG 1158311 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| || || || | ||| | ||| | ||||||| || || || Sbjct 1158312 ATACCCTCCTTGTCTTGGATCTT-TGCCTTAACGTTGTCGATGGTGTCGGACGACTCTAC 1158370 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| || || || || | ||| || || ||||| |||||| Sbjct 1158371 CTCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGACGAAGATTTGCATA 1158419 >seq1 Length=3319996 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || |||||||| ||||||||||| || | || |||| || Sbjct 2718826 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGCTGC 2718885 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || |||| ||||||||||| | || | ||| || ||||| || ||| Sbjct 2718886 TTCCCCGCGAAGATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTTC 2718945 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| || | ||| | ||| ||| || || || |||| |||||| || || || || Sbjct 2718946 GCCTTC-ACGTTGTCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGT 2719004 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || || |||||||||||| Sbjct 2719005 AAGAGTCTTGACGAAGATCTGCATA 2719029 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 33541 ACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || |||||||| || || ||||| || |||||||| ||||| | || || Sbjct 2718541 ACCAAGATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTC 2718600 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | || || || || || || | ||||||||| || | || | ||| || || || Sbjct 2718601 GAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCCTG 2718660 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| ||| |||| | | ||| | |||||| || ||||| || | ||||| || | Sbjct 2718661 AATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCT 2718719 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | || || || |||||||||||| Sbjct 2718720 TGCCGGTGAGGGTCTTGACGAAGATCTGCATA 2718751 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || ||||||||||||||||| ||||| |||| || | ||| Sbjct 2719054 TGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTGC 2719113 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || |||||||| || | |||||||| || | || | || || ||||| || || Sbjct 2719114 TTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT- 2719172 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | || | ||| | ||||| || || || || | |||||||| || || || Sbjct 2719173 TGCCTTCACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGT 2719232 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || || |||||||||||| Sbjct 2719233 AAGGGTCTTGACGAAGATCTGCATA 2719257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701964911360