Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5 215 7e-50 seq29 86.0 9e-11 >seq5 Length=1807594 Score = 215 bits (238), Expect = 7e-50 Identities = 382/547 (70%), Gaps = 15/547 (3%) Strand=Plus/Minus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||| ||| | |||||| || | |||||||||||||| ||||| ||||| ||||| | Sbjct 1323801 GCAGATTTGGCAGATGTAC-AAGACTGCCGAGGCCTCCTTCTGGACGGCCGAAGAGGTGG 1323743 Query 1455832 ACCTCGGCGCCGACACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTCA 1455888 |||||||| |||| || | ||| || || | | || |||| ||||| |||| Sbjct 1323742 ACCTCGGCCACGACCTCGTGGATTGGCACCAACGTCTCAACAACAACGAACGCCACTTCA 1323683 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||| || || ||||| || ||||||| ||| || || || |||||| || | | Sbjct 1323682 TCTCGCATGTTCTGGCCTTCTT-CGCCGCCTCCGACGGGATAGTCAACGAGAATCTCGTC 1323624 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | ||||| || ||||| ||| |||| || || | |||||||| ||||| ||| Sbjct 1323623 GAACGCTTCTCTAACGAGGTTCAAGCCGCAGAAGCCCGCTGTTTTTACGGCTTCCAAATC 1323564 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || ||||| |||| || ||||| ||||| |||||||| || || || |||| ||| Sbjct 1323563 ATGATGGAAAATGTCCATTCGGAAACGTACTCACTCCTGATTGATACATATATCAAAGAC 1323504 Query 1456069 CCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128 | ||| ||||| ||| || ||||||||||| ||||||| | | || || Sbjct 1323503 ACCCAAGAGCGGGACCGCCTGTTCAATGCCATCGACACCGTGCCGTGCATCAAAAAGAAA 1323444 Query 1456129 GCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185 || || ||||| | |||||| |||| || |||| ||| |||||||| | Sbjct 1323443 GCAGATTGGGCCCTCCGCTGGATCTCTGACAA-AAGATCCTC----CTTCGCCGAGCGCC 1323389 Query 1456186 TCGTCGGCTTTGC-CGCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTT 1456244 | || | ||||| ||||||| ||||| || ||||| || ||| ||| || || | Sbjct 1323388 TGGTGGCGTTTGCGTGCGTCGAAGGCATATTCTTCTCCGGGTCCTTCGCCGCAATATTCT 1323329 Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGC 1456304 |||| ||||| |||||| | ||||| || | | |||| |||||| | |||||||| Sbjct 1323328 GGCTGAAGAAACGCGGCTTAATGCCAGG-CCTGACCTTTTCAAACGAACTGATCAGTCGA 1323270 Query 1456305 GACGAAG 1456311 ||||||| Sbjct 1323269 GACGAAG 1323263 Score = 208 bits (230), Expect = 1e-47 Identities = 384/550 (70%), Gaps = 31/550 (6%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| |||||||| || |||||||| |||||| | |||| Sbjct 1325110 GATCTGGCAAATGTAC-AAGAAGGCTGAGGCCTCTTTCTGGACCGCGGAGGAGATGGACC 1325168 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| | | |||| | |||||||| ||| Sbjct 1325169 TCTCCAAGGATCTCCACG----ACTGGAACACGCGTCTCAACGACAATGAGCGCCACTTC 1325224 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || || ||||| ||||| || ||| ||| ||| || ||||| ||||||||| | Sbjct 1325225 GTCTCCCATGTCCTTGCCTTCTT-CGCAGCCTCCGACGGTATCGTCAACGAGAACCTCGT 1325283 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || || || || || | ||||| || | || || || ||||| || Sbjct 1325284 CGAGCGTTTCTCTAACGAAGTTCAGGCCGCCGAGGCTCGCTGCTTCTATGGCTTCCAAAT 1325343 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || || |||||||||||||| || ||||| ||||| |||||||| ||| |||| || Sbjct 1325344 TATGATGGAGAACATCCACTCTGAGACATACTCCCTCCTCATCGACACGTACATCAAAGA 1325403 Query 1456068 CCCGGTCGAGAA---GGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAA 1456124 ||| | || | ||| |||||||| ||| |||| || | || | | | ||| Sbjct 1325404 CCC---CAAGCAACGGGAGCACCTCTTCGACGCGGTCGAGACCATCCCTTGCATCAAGAA 1325460 Query 1456125 AAAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAG 1456181 ||||| |||||||| | |||||| | |||| || | | ||| || || || Sbjct 1325461 GAAGGCTGACTGGGCCCTCCGGTGGATCTCCGACAA-GAAGTCTTCG----TTCGCTGAA 1325515 Query 1456182 CGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCAT 1456239 || || |||| ||| || | ||||||||| || || ||||| ||| ||| ||| |||| Sbjct 1325516 CGTCTTGTCGCCTTCGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCCTTC-GCGTCCAT 1325574 Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCA 1456299 ||| |||||||||||||| || |||||||| |||| || ||| ||||| || |||| Sbjct 1325575 CTTCTGGCTCAAGAAGCGTGGACTCATGCCTGGTC-TCACCTTCTCGAACGAGTTGATCA 1325633 Query 1456300 GTCGCGACGA 1456309 | || ||||| Sbjct 1325634 GCCGTGACGA 1325643 Score = 143 bits (158), Expect = 4e-28 Identities = 158/205 (77%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 |||||| |||||||| ||||||||||| | |||||||||||||||||| || || | Sbjct 1325820 CTGCCGTGCGCGCTCATTGGCATGAACGCGAA-GCTCATGTGCCAGTACATCGAGTTC-G 1325877 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690 | |||||||||||||||| || |||||| || ||||| |||| | ||||||| Sbjct 1325878 TGGCCGACCGCCTGCTCGTTGCCCTCGGCGACG-AGAAGTTCTACAAGGTCACCAACCCT 1325936 Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTG 1456750 ||| | ||||| ||||||||||| |||||||||||||||| |||||| || || Sbjct 1325937 TTCGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGTC 1325996 Query 1456751 GC-GAGTACGCCAAGGCCGGCGTCA 1456774 | || ||| ||||||| || |||| Sbjct 1325997 TCAGATTACTCCAAGGCTGGTGTCA 1326021 Score = 105 bits (116), Expect = 1e-16 Identities = 131/175 (75%), Gaps = 7/175 (4%) Strand=Plus/Minus Query 1456569 CGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTT 1456628 || |||| || | || ||||| ||||||| ||| |||||| |||| ||||| ||||| Sbjct 1323087 CGTTGCCAGTCGGCCTTATCGGTATGAACGTCACT-CTCATGCGCCAATACATCGAATTC 1323029 Query 1456629 TGTCGCCGACCGCCTGCTCGCGGCGCTCGGC--TGCGGAGAAGCACTACCGGACGGCCAA 1456686 ||||| || ||||| || | |||| || |||| ||||| || | || ||||| Sbjct 1323028 -GTCGCGGATCGCCTTCTGGTTTCGCTTGGAAATGCG---AAGCATTATCACACCGCCAA 1322973 Query 1456687 CCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 || ||| ||||||||| |||| || ||| ||||||||||||||||||| ||| Sbjct 1322972 TCCCTTCGAATGGATGGACATGATTTCCCTCCAGGGCAAGACCAACTTTTTTGAG 1322918 >seq29 Length=473663 Score = 86.0 bits (94), Expect = 9e-11 Identities = 75/92 (82%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 315201 GAGGCCAAAGTCAGACACCTTGAGGTTCCACTTGGCGTCGAGCAAGAGGTTCATC-GCTT 315259 ||| ||||||||| | |||||||||| || ||||| | ||||||||||||| | |||| Sbjct 150949 GAGACCAAAGTCACAGACCTTGAGGTCGCAGTTGGCATTGAGCAAGAGGTTCGCCGGCTT 151008 Query 315260 GAGATCGCGGTGGACGACGCCCGACGAGTGCA 315291 ||| ||||||||||| | | ||| ||| |||| Sbjct 151009 GAGGTCGCGGTGGACAATGTCCGCCGAATGCA 151040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177762202466296