Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4 116 4e-21 seq1 105 7e-18 seq11 91.5 1e-13 >seq4 Length=1918071 Score = 116 bits (128), Expect = 4e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || || || || ||||| || |||||||| || | |||| | ||| |||||| Sbjct 1157985 AGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTCGAGC 1158044 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || || || || | |||||||||||| || || |||||||| || |||||||| Sbjct 1158045 TGCTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTGAATC 1158104 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || ||| | |||||||||||||| || || || || || || || || Sbjct 1158105 TTCGCCTTTACGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTTTCCC 1158164 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || ||||| || |||||| Sbjct 1158165 GTCAACGTCTTGACGAAGATCTGCATT 1158191 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || || ||||| |||||||||||||| | ||| | || ||| Sbjct 1158438 ACGAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGGCCATCCTCG 1158497 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || ||||| || ||||| ||||| || ||||| || || || ||| Sbjct 1158498 AGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 1158557 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || || || ||||| || || || || Sbjct 1158558 ATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGCGTGATAGTCTTG 1158617 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || ||||| Sbjct 1158618 CCAGTCAAGGTCTTCACAAAGATCTGCAT 1158646 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 |||| || | ||| || | || || || || || || ||||| || ||||||||||| | Sbjct 1158190 TTCCACCACGGAGACGGAGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 1158249 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 |||| ||| | || || | ||| || || ||||| || | |||||| |||||||| Sbjct 1158250 ACAAC-GTGCGCCCATCTTCCAACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGGA 1158308 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || ||||| || ||| || || ||| | ||||||||||| || Sbjct 1158309 GGGATACCCTCCTTGTCTTGGATCTTTGCCTTAACGTTGTCGATGGTGTCGGACGACTCT 1158368 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| || ||||| | || || ||||| |||||||| Sbjct 1158369 ACCTCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 1158418 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| ||||| ||||| ||||||||||||||| Sbjct 1157685 CCGCCACGGAGACGAAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAG 1157744 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || ||||| || || || || || || | |||||||| |||||||| Sbjct 1157745 AGCGTGCGTCCATCTTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 1157804 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || ||| | |||||||| || || || Sbjct 1157805 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACC 1157864 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || ||||| | || || ||||| || ||||| Sbjct 1157865 TCAAGAGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1157911 >seq1 Length=3319996 Score = 105 bits (116), Expect = 7e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 ||||||| || || || ||||| || |||||||||||| | || || || || | Sbjct 2718821 CGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCA 2718880 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 |||| || || || || |||| ||||||||||| || || || || || || ||||| | Sbjct 2718881 GCTGCTTCCCCGCGAAGATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGA 2718940 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | || || || ||| | || |||||||| || || || || || ||||| || | Sbjct 2718941 TCTTCGCCTTCACGTTGTCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGC 2719000 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||| | ||| || ||||| || ||||| Sbjct 2719001 CGGTAAGAGTCTTGACGAAGATCTGCAT 2719028 >seq11 Length=1123092 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || ||||| ||||| || ||||||||||||| || ||| | Sbjct 313838 AGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGG 313779 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 ||| |||||||| ||||| || || ||||| |||||||| || ||||| |||| Sbjct 313778 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGC 313724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395190720160