Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5 129 8e-25 >seq5 Length=1807594 Score = 129 bits (142), Expect = 8e-25 Identities = 294/440 (67%), Gaps = 7/440 (2%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| ||||| || | || || |||| ||| || | |||||| ||||| || || Sbjct 1323240 GCAGGCAAAGTCCGTGTGCATTCCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTCAG 1323299 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||||| || || || || ||||| ||||| || || || || || || ||||| Sbjct 1323300 GCCTGGCATTAAGCCGCGTTTCTTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAGAA 1323359 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT-- 39793 |||||||| || ||||| || || || | ||| || || | ||| || ||| Sbjct 1323360 TATGCCTTCGACGCACGCAAACGCCACCAGGCGCTCGGCG-AAGGAGGATCTTT-TGTCA 1323417 Query 39794 ---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 39850 ||||| | |||||||| |||||||| || | || |||| || || || ||| Sbjct 1323418 GAGATCCAGCGGAGGGCCCAATCTGCTTTCTTTTTGATGCACGGCACGGTGTCGATGGCA 1323477 Query 39851 TTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATAC 39910 || || || | || | | ||||| | ||||||||| || | || ||| Sbjct 1323478 TTGAACAGGCGGTCCCGCTCTTGGGTGTCTTTGATATATGTATCAATCAGGAGTGAGTAC 1323537 Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970 |||| ||||||| ||||| ||| || || || ||||||||||| | ||||| | Sbjct 1323538 GTTTCCGAATGGACATTTTCCATCATGATTTGGAAGCCGTAAAAACAGCGGGCTTCTGCG 1323597 Query 39971 ATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCG 40030 ||| ||||| | | || | ||| | | ||| || || ||||| || || ||| Sbjct 1323598 GCTTGAACCTCGTTAGAGAAGCGTTCGACGAGATTCTCGTTGACTATCCCGTCGGAGGCG 1323657 Query 40031 GCAAAAAATGCCAATACATG 40050 || || || |||| ||||| Sbjct 1323658 GCGAAGAAGGCCAGAACATG 1323677 Score = 104 bits (114), Expect = 3e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || | |||||| || | || || || ||||| || || ||||| Sbjct 1325668 GCAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGCTGATCAACTCGTTCGAGAAGGTGAG 1325609 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||||||| || |||||||| |||||||| || |||| || || || ||||| ||||| Sbjct 1325608 ACCAGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCAGAGAAGAA 1325549 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || || || || ||||| Sbjct 1325548 AATACCCTCGACGGCAGCGAAGGCGACAAG 1325519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686904438129120