Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 109 7e-19 seq42 107 2e-18 seq8 82.4 1e-10 >seq5 Length=1807594 Score = 109 bits (120), Expect = 7e-19 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| ||| ||| | || || ||||| || ||||| ||||| ||| || || Sbjct 1323243 GGCAAAGTCCGTGTGCATTCCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTCAGGCC 1323302 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 |||||| | || || ||||||| ||| | || ||| ||| |||||||||||||| || Sbjct 1323303 TGGCATTAAGCCGCGTTTCTTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAGAATAT 1323362 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 || || || ||||||||||| | ||||| |||||||||||| Sbjct 1323363 GCCTTCGACGCACGCAAACGCCACCAGGCGCTCGGCGAAGGAG 1323405 >seq42 Length=219827 Score = 107 bits (118), Expect = 2e-18 Identities = 206/302 (68%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 182549 ATCTGTCATAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCC 182608 ||| ||||| ||||| || ||||||| || || || ||| ||||| || Sbjct 65993 ATCAGTCATGATCATTAGTTGACCATATCGCAGGTCTTTCGTATCCCTATAGTCCTTGTT 66052 Query 182609 TTGTTGAAGACCAAGGATCTTCTTGAGATCATTGAACTCCTGGTT--TGATGTAAGCTGT 182666 ||||| ||||| ||||||||||||| || | || ||||| || | ||| | || Sbjct 66053 GTGTTGTAGACCGAGGATCTTCTTGATATTCTGGATCTCCTCATTCTTCATG--ATTTGG 66110 Query 182667 GCCACCGAAGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGA 182726 | | ||||| ||||| || |||||| ||||| |||||||| || |||| Sbjct 66111 TCATGCTTGGCGTCACGAACGTTGAGTAGTTTACCACGAAGGGGGAACACGCCATAGTTG 66170 Query 182727 TCACGACCAACGACAGAGAGACCCGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTG 182786 ||||| || | |||| |||||| || | || || | || || || || || |||||| Sbjct 66171 TCACGCCCGATGACACTGAGACCAGCGATAGCTAGAGACTTGGCGGAGTCTCCTTCCGTG 66230 Query 182787 ACAATGAGAGTACACTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCGTCATCCAACTTG 182846 | ||||||||||| | | | | || | ||||| || |||||||| || ||||||| Sbjct 66231 AGGATGAGAGTACAATCTGCCGCTTTTCGTGTACCAGCGTTGTTCGCATCGGCCAACTTC 66290 Query 182847 GG 182848 || Sbjct 66291 GG 66292 >seq8 Length=1462401 Score = 82.4 bits (90), Expect = 1e-10 Identities = 174/260 (67%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883 ||||||| | ||||| || ||||| ||| ||| ||||| | | | ||||| Sbjct 1395175 TGGATGTTGAGGCCAATGCCGCCAGCAGTCTTGCTGATCATGGCACAGTTCTTGAGAGTA 1395116 Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943 | |||||||| | ||| ||||| ||||| | | ||||||||| | | ||| Sbjct 1395115 TCGTAGATACCTTCGATGGAGTCATCCTTCATACATACAAGGAAGCATGAGCTGAGCTGA 1395056 Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGAC 112003 || ||||| || || ||||||||||| |||| ||||| |||| | ||||||| Sbjct 1395055 GGATGAGGTGTTCCGGCGTTGAAGAGGGTGGGTGACGCGTGGGTGAAGTAGCGTTGGGAC 1394996 Query 112004 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACC 112063 || | ||| || || | | | || || || | ||||| ||||||| || || Sbjct 1394995 ATAAGTTGGTAGGTTTCGATGGCCCGGTCGATATCGTTACCGTGAATGCCGACAGCCACA 1394936 Query 112064 CGCATGAACATGTACTGTGG 112083 ||||| ||||||| ||| || Sbjct 1394935 CGCATCAACATGTGCTGGGG 1394916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028011996800