Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 113 5e-20 seq42 107 2e-18 seq25 86.0 7e-12 seq8 86.0 7e-12 >seq5 Length=1807594 Score = 113 bits (124), Expect = 5e-20 Identities = 167/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 94709 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTA 94768 |||| ||||| || || || | || | || || || | ||||| || || ||||| Sbjct 1325418 AGCACCTCTTCGACGCGGTCGAGACCATCCCTTGCATCAAGAAGAAGGCTGACTGGGCCC 1325477 Query 94769 TGAAGTGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 94825 | |||| | || | ||||| ||| || ||||| || || |||| || || Sbjct 1325478 TCCGGTGGATCTCCGACAAGAAGTC---TTCGTTCGCTGAACGTCTTGTCGCCTTCGCTG 1325534 Query 94826 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGA 94884 || |||||||| ||||||||||| |||||| ||| | || | |||||||||||||| Sbjct 1325535 CCGTCGAGGGTATTTTCTTCTCTGGCTCCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGT 1325593 Query 94885 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 || |||||||| |||||| |||||| |||||| | ||| ||||||||||| Sbjct 1325594 GGACTCATGCCTGGTCTCACCTTCTCGAACGAGTTGATCAGCCGTGACGAGGG 1325646 >seq42 Length=219827 Score = 107 bits (118), Expect = 2e-18 Identities = 206/301 (68%), Gaps = 2/301 (1%) Strand=Plus/Plus Query 169201 ATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACC 169260 ||| ||||||||||| || ||||||| || || || ||| ||||||||| Sbjct 65993 ATCAGTCATGATCATTAGTTGACCATATCGCAGGTCTTTCGTATCCCTATAGTCCTTGTT 66052 Query 169261 CTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGT 169320 ||||| ||||| | ||||||||||| || | || ||| | || ||| || || Sbjct 66053 GTGTTGTAGACCGAGGATCTTCTTGATATTCTGGATCTCCTCATTCTTCATGATTTG-GT 66111 Query 169321 GACAGA-GGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGAT 169379 | ||| || ||||| || || |||||||| ||||| || || |||| | Sbjct 66112 CATGCTTGGCGTCACGAACGTTGAGTAGTTTACCACGAAGGGGGAACACGCCATAGTTGT 66171 Query 169380 CACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGA 169439 |||| || | ||| |||||| |||| || |||| ||| || ||||| || || |||| Sbjct 66172 CACGCCCGATGACACTGAGACCAGCGATAGCTAGAGACTTGGCGGAGTCTCCTTCCGTGA 66231 Query 169440 CGATGAGCGTACATTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGG 169499 |||||| ||||| | | | | || | ||||| || ||||||||||| |||| || | Sbjct 66232 GGATGAGAGTACAATCTGCCGCTTTTCGTGTACCAGCGTTGTTCGCATCGGCCAACTTCG 66291 Query 169500 G 169500 | Sbjct 66292 G 66292 >seq25 Length=561608 Score = 86.0 bits (94), Expect = 7e-12 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291 ||| | |||||||| || || || ||| | | || || ||| || || || || | | Sbjct 331828 CGCTTCTACCAAGCGTCGACGTCCGAGCTCTACGGCAAGGTCGTCGAGACCCCGCAGAGC 331769 Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTG 7350 ||| ||| ||||||||||| || ||| |||||| ||| | ||| | | | || | || Sbjct 331768 GAGACGACGCCCTTCTACCCGCGGTCGCCCTACGGTGTCGCGAAGCTCTACAGC-TACTG 331710 Query 7351 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7410 | || | || ||||||||| | ||||| ||| |||||| ||| ||||||||||| Sbjct 331709 GATCACCGTGAACTACCGCGAGGCGTACGGCATGTACGCGTGCAACGGCATCCTCTTCAA 331650 Query 7411 CCATGA 7416 ||| || Sbjct 331649 CCACGA 331644 >seq8 Length=1462401 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 104607 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 104666 || |||| ||||| | ||||||||||| || |||||| |||||| |||| ||||| Sbjct 1395355 CTTTCGCCATCTATATCGAGCCATGGCATGCCGATATCTACGAGTTCATTGATTTGCGCA 1395414 Query 104667 TCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 104726 ||||| || | ||||| | || |||||| | |||| |||||||||||| || | Sbjct 1395415 AAAACCACGGCAAGGAGGAAGTTCGCGCGCGCGATTTGTTCTACGCTCTCTGGATCCCTG 1395474 Query 104727 ATCTCTT 104733 ||||||| Sbjct 1395475 ATCTCTT 1395481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257096293920