Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq4 138 3e-27 seq1 132 1e-25 >seq4 Length=1918071 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | ||||||||||| ||||| ||||| || || || || || || Sbjct 1158188 CATTCCACCACGGAGACGGAGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 1158247 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || ||||||||||| | || ||||| |||||||| ||||| || ||||| || Sbjct 1158248 GGACAACGTGCGCCCATCTTCCAACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGG 1158307 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || || || || || || || || || || || | || || | || Sbjct 1158308 AGGGATACCCTCCTTGTCTTGGATCTTTGCCTTAACGTTGTCGATGGTGTCGGACGACTC 1158367 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || || || || ||||| Sbjct 1158368 TACCTCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 1158418 Score = 120 bits (132), Expect = 9e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || ||| ||| || ||||| || || || || | || || |||||||| | Sbjct 1157705 CAAG-TGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCATCTTCGA 1157763 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 |||| ||||| || ||||| || || ||||| || || || || || || || ||||| | Sbjct 1157764 GTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGA 1157823 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || ||||||| || || | || || ||||| || | ||||||| Sbjct 1157824 TCTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCTTTC 1157883 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || || || || || |||||||| Sbjct 1157884 CGGTGAGGGTCTTGACGAAGATCTGCAT 1157911 >seq1 Length=3319996 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || ||||| |||||||||||||| || || || || ||||| Sbjct 2719026 CATACCACCGCGAAGACGGAGGACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATC 2719085 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || ||||| || || |||||||| || || ||||| || || Sbjct 2719086 GGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGG 2719145 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || ||||| || || || || || || || |||| || || | || Sbjct 2719146 GGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATCGTGTCCGAAGACTC 2719205 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || | ||||| || || || || || || || |||||||| Sbjct 2719206 GACTTCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2719256 Score = 100 bits (110), Expect = 9e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 ||||||| || || ||| || || || ||||| || || | || || ||||| || | Sbjct 2718543 CAAGATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGA 2718602 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || || ||||| ||||| ||||| || || || || || || |||||||||| Sbjct 2718603 GCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGAA 2718662 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || || || | || || | || || || | || | ||||| | Sbjct 2718663 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGC 2718722 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || || || || || |||||||| Sbjct 2718723 CGGTGAGGGTCTTGACGAAGATCTGCAT 2718750 Score = 87.8 bits (96), Expect = 5e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || |||||||| || || || || || || || || || Sbjct 2719254 CATACCACCACGGAGGCGGAGGACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTC 2719313 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || |||||||| ||||| || |||||||| || || Sbjct 2719314 GGACAGGGTCCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCGGG 2719373 Query 140627 AGGAAT 140632 ||| || Sbjct 2719374 AGGGAT 2719379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515244537587924