Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq5 116 4e-21 seq8 111 2e-19 >seq5 Length=1807594 Score = 116 bits (128), Expect = 4e-21 Identities = 336/509 (66%), Gaps = 10/509 (2%) Strand=Plus/Plus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC-- 59670 || |||||| ||| |||||||| |||||| || || || | || ||| ||| || Sbjct 1325141 TCTTTCTGGACCGCGGAGGAGATGGACCTCTCCAAGGATCTCCACGACTGGAACACGCGT 1325200 Query 59671 -TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729 |||| || | |||| || ||| || ||||| ||||||||||| || || Sbjct 1325201 CTCAACGACAATGAGCGCCACTTCGTCTCCCATGTCCTTGCCTTCTTCGCAGCCTCCGAC 1325260 Query 59730 GGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCC 59789 || || || | || || | | | | || || || || || ||| |||||||| Sbjct 1325261 GGTATCGTCAACGAGAACCTCGTCGAGCGTTTCTCTAACGAAGTTCAGGCCGCCGAGGCT 1325320 Query 59790 CGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTC 59849 || | ||||| | | || | | ||| |||||||| ||||| ||||| ||| Sbjct 1325321 CGCTGCTTCTATGGCTTCCAAATTATGATGGAGAACATCCACTCTGAGACATACTCCCTC 1325380 Query 59850 ATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTC-TGTTCCGTGCCATAGA 59908 | ||||| | || |||| || || ||| | || | | | ||| || | || Sbjct 1325381 CTCATCGACACGTACATCAAAGACCCC-AAGCAACGGGAGCACCTCTTCGACGCGGTCGA 1325439 Query 59909 GACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGA--GTCCTGG 59965 ||| |||| ||| | || | || || || |||||| | | |||||| | | | Sbjct 1325440 GACCATCCCTTGCA-TCAAGAAGAAGGCTGACTGGGCCCTCCGGTGGATCTCCGACAAGA 1325498 Query 59966 AG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTG 60024 || | || || || ||||||| | || || || ||| || || || |||||||||| Sbjct 1325499 AGTCTTCGTTCGCTGAACGTCTTGTCGCCTTCGCTGCCGTCGAGGGTATTTTCTTCTCTG 1325558 Query 60025 GCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCT 60084 |||| ||| | || ||||||||||| |||||||| |||||||| || || | |||| Sbjct 1325559 GCTCCTTCGCGTCCATCTTCTGGCTCAAGAAGCGTGGACTCATGCCTGGTCTCACCTTCT 1325618 Query 60085 CCAACGAGCTGATTTCCCGGGACGAGGGC 60113 | |||||| |||| ||| ||||||||| Sbjct 1325619 CGAACGAGTTGATCAGCCGTGACGAGGGC 1325647 >seq8 Length=1462401 Score = 111 bits (122), Expect = 2e-19 Identities = 158/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 79684 GCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGG 79743 || || | |||||| || |||||||| || ||||| ||||| ||||||||| || ||| Sbjct 1395133 GCACAGTTCTTGAGAGTATCGTAGATACCTTCGATGGAGTCATCCTTCATACATACAAGG 1395074 Query 79744 AAGCA---GCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCG 79800 ||||| ||| | ||| || | || ||||||||||||||||| || | |||| Sbjct 1395073 AAGCATGAGCTG---AGCTGAGGATGAGGTGTTCCGGCGTTGAAGAGGGTGGGTGACGCG 1395017 Query 79801 TGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCG 79860 || |||||| | |||| ||| || | ||| || || || | || || |||| Sbjct 1395016 TGGGTGAAGTAGCGTTGGGACATAAGTTGGTAGGTTTCGATGGCCCGGTCGATATCGTTA 1394957 Query 79861 CCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901 ||||| |||||||| || || ||||| || | || |||||| Sbjct 1394956 CCGTGAATGCCGACAGCCACACGCATCAACATGTGCTGGGG 1394916 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||||| || | ||||||||||| ||||| |||||||||||||| ||||| | ||| Sbjct 1396858 GGCGCGTG--CGGAGGTAGTACATGCCGGTCTTCAGACCCTTCTTCCAGCCGTAGAAGTG 1396801 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 |||||||| |||| | || ||||| || || | | ||| | |||| ||| Sbjct 1396800 CATACTCGTGAGCTGGTTCACGGTCGGGGACTGCAGGTGCACGTTCAAGCTCTGGCTCTG 1396741 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 | ||| | || || ||||| || || | |||| |||| ||| || | |||||||| Sbjct 1396740 GCAAATGAAGGCGCCACGGTCCGCGGCAAGCTCGAGGACCTTCTTCTGTGAGATCTCCCA 1396681 Query 78363 GATGGTCCGGTAAATGGCCTT 78383 | |||| ||| || ||||| Sbjct 1396680 AACGGTCTTGTAGATCGCCTT 1396660 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | || ||||| || || |||||||| || || |||| || || | | Sbjct 1394916 CCCCAGCACATGTTGATGCGTGTGGCTGTCGGCATTCACGGTAACGATATCGACCGGGCC 1394975 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||| || ||| | || ||| ||| | |||||| |||||| | || ||||| ||| Sbjct 1394976 ATCGAAACCTACCAACTTATGTCCCAACGCTACTTCACCCACGCGTCACCCACCCTCTTC 1395035 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGC---TGTTTCCTAGTGGCTATGAAGGAT 19279 |||||||| || | || ||| | ||| || ||||| || |||||||||| Sbjct 1395036 AACGCCGGAACACCTCATCCTCAGCT---CAGCTCATGCTTCCTTGTATGTATGAAGGAT 1395092 Query 19280 GACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGC 19320 ||| ||| || || |||||||| || |||||| | || || Sbjct 1395093 GACTCCATCGAAGGTATCTACGATACTCTCAAGAACTGTGC 1395133 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 79387 AAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCC 79446 ||||| || |||||||| || || ||| | ||||| || | ||||| | ||| Sbjct 1395481 AAGAGATCAGGGATCCAGAGAGCGTAGAACAAATCGCGCGCGCGAACTTCCTCCTTGCCG 1395422 Query 79447 TGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATG 79506 ||||| |||| || | || || ||| ||||| ||||| ||||| | ||||||| Sbjct 1395421 TGGTTTTTGCGCAAATCAATGAACTCGTAGATATCGGCATGCCATGGCTCGATATAGATG 1395362 Query 79507 GCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAA 79566 ||||| | || |||||| |||||| || | |||||| || || || | | | Sbjct 1395361 GCGAAAGCGCCAGGACGCTTGTTGCCGCCTTGATCGACGTAACGAGCAGTCGCATCGTAT 1395302 Query 79567 ACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCC 79610 |||| ||||| || |||||||||| | | |||||| || || Sbjct 1395301 GCTCGAAGCATAGGAACGATGCCGTTCGAGTAGCCGTTGGTGCC 1395258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521316867520