Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5 154 2e-32 seq42 89.7 6e-13 seq8 87.8 2e-12 >seq5 Length=1807594 Score = 154 bits (170), Expect = 2e-32 Identities = 354/526 (67%), Gaps = 14/526 (3%) Strand=Plus/Plus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| ||| ||| ||||| |||| || |||| ||| || ||||| | ||||| Sbjct 1323243 GGCAAAGTCCGTGTGCATTCCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTCAGGCC 1323302 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| | || || ||||||| ||| || || || |||||| || |||||| || Sbjct 1323303 TGGCATTAAGCCGCGTTTCTTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAGAATAT 1323362 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATC----GGAAGTCA 74925 ||||||||| |||||||| || || ||||| | ||||| || | ||| | || | Sbjct 1323363 GCCTTCGACGCACGCAAACGCCACCAGGCGCTCGGCGAA-GGAGGATCTTTTGTCAGAGA 1323421 Query 74926 TCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGG 74984 |||| | ||||| || ||||| ||||| ||| || || || ||||| || | | Sbjct 1323422 TCCAGCGGAGGGCCCAATCTGCTTTCTTTTTGA-TGCACGGCACGGTGTCGATGGCATTG 1323480 Query 74985 AAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTC 75044 || |||| || ||||| || || |||| | ||||||| ||||||||||| Sbjct 1323481 AACAGGCGGTCCCGCTCTTGGGTGTCTTTGATATATGTATCAATCAGGAGTGAGTACGTT 1323540 Query 75045 TCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATC 75104 |||||||| | || | | ||| | |||| ||| | || || ||||| Sbjct 1323541 TCCGAATGGACATTTTCCATCATGATTTGGAAGCCGTAAAAACAGCGGGCTTCTGCGGCT 1323600 Query 75105 TGTACATCCTTTGAAAA--ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGG 75162 || || || || || || ||| | ||| |||||| |||| || ||||| ||||||| Sbjct 1323601 TGAACCTCGTTAGAGAAGCGTTC--GACGAGATTCTCGTTGACTATCCCGTCGGAGGCGG 1323658 Query 75163 CGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCC 75219 |||| || ||||| || ||| |||||||| || | || ||| ||| || || Sbjct 1323659 CGAAGAAGGCCAGAACATGCGAGATGAAGTGGCGTTCGTTGTTGTTGAGACGTTGGTGCC 1323718 Query 75220 AATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 ||||| ||||| | | || | ||| ||| |||||||||| Sbjct 1323719 AATCCACGAGGTCGTGGCCGAGGTCCACCTCTTCGGCCGTCCAGAA 1323764 Score = 145 bits (160), Expect = 8e-30 Identities = 339/506 (67%), Gaps = 8/506 (2%) Strand=Plus/Minus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| || || | ||| ||||| || ||||| || | || |||||||| ||||||||||| Sbjct 1325647 GCCCTCGTCACGGCTGATCAACTCGTTCGAGAAGGTGAGACCAGGCATGAGTCCACGCTT 1325588 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | ||| ||||||| |||||| ||| |||||| || || ||||| || || Sbjct 1325587 CTTGAGCCAGAAGATGGACGCGAAGGAGCCAGAGAAGAAAATACCCTCGACGGCAGCGAA 1325528 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTG-CATC--GGAAGTCATCCAAGTCTGAGCCCATTC 74944 ||||||||| |||| ||||||| | | || | | ||||| | ||||| || Sbjct 1325527 GGCGACAAGACGTTCAGCGAACGAAGACTTCTTGTCGGAGATCCACCGGAGGGCCCAGTC 1325468 Query 74945 AGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGG-CTTGCCTTCTCTT 75003 ||| || |||| ||||| || |||| ||| | ||||||| | || | ||| Sbjct 1325467 AGCCTTCTTCTTGATGCAAGGGATGGTCTCGACCGCGTCGAAGAGGTGCTCCCGTTGCTT 1325408 Query 75004 CGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGT 75063 ||| || |||| | | |||| || | || ||||| ||||| || || || ||| Sbjct 1325407 -GGGGTCTTTGATGTACGTGTCGATGAGGAGGGAGTATGTCTCAGAGTGGATGTTCTCCA 1325349 Query 75064 TGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAAT 75123 | | ||| | | ||||| | || ||||| || ||| || || || || ||| Sbjct 1325348 TCATAATTTGGAAGCCATAGAAGCAGCGAGCCTCGGCGGCCTGAACTTCGTTAGAGAAAC 1325289 Query 75124 TCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTT 75183 | | ||| ||||| ||||||| ||||| ||||| ||||| || || || || Sbjct 1325288 GCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCTGCGAAGAAGGCAAGGACATGGG 1325229 Query 75184 TGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCA 75240 || ||||||||||||| ||| ||| | ||| ||| || | || ||| | | Sbjct 1325228 AGACGAAGTGGCGCTCATTGTCGTTGAGACGCGTGTTCCAGTCGTGGAGATCCTTGGAGA 1325169 Query 75241 AATCAATCTCCTCGACCGTCCAGAAA 75266 || |||||||| | ||||||||| Sbjct 1325168 GGTCCATCTCCTCCGCGGTCCAGAAA 1325143 >seq42 Length=219827 Score = 89.7 bits (98), Expect = 6e-13 Identities = 208/309 (67%), Gaps = 6/309 (2%) Strand=Plus/Plus Query 118045 ATCGGTCATGATCATCAGGCGGCCGTACCGTAAATCTCTCAGGGAGTTATAAACCTTACC 118104 ||| ||||||||||| || | || || || | ||| || |||| |||| Sbjct 65993 ATCAGTCATGATCATTAGTTGACCATATCGCAGGTCTTTCGTATCCCTATAGTCCTTGTT 66052 Query 118105 ATGTTGGAGCCCGAGGATCTTTTTAAGGTTGGAAAATTCCTCATTTTCCGTCACCTGTTT 118164 ||||| || ||||||||||| || | || | |||||||| | | | | || | Sbjct 66053 GTGTTGTAGACCGAGGATCTTCTTGATATTCTGGATCTCCTCATTCTTCATGATTTG-GT 66111 Query 118165 TATG-GTGGCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACTTGT 118223 ||| ||||||| ||||||||| | | ||||| || || || ||||||||| | |||| Sbjct 66112 CATGCTTGGCGTCACGAACGTTGAGTAGTTTACCACGAAGGGGGAACACGCCATAGTTGT 66171 Query 118224 CACGGCCCACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAA 118283 |||| || | || || | || || ||||| || | ||| || ||||| || || || | Sbjct 66172 CACGCCCGATGACACTGAGACCAGCGATAGCTAGAGACTTGGCGGAGTCTCCTTCCGTGA 66231 Query 118284 TAATAAGAGTGCACTCGGTGCTGCGAT--GAGTACCGGCCCAATTAGCATCATCCAGCTT 118341 || ||||| || || ||| || | | ||||| || || ||||| ||| ||| Sbjct 66232 GGATGAGAGTACAATC--TGCCGCTTTTCGTGTACCAGCGTTGTTCGCATCGGCCAACTT 66289 Query 118342 CGGAACGCC 118350 ||| | ||| Sbjct 66290 CGGTAAGCC 66298 >seq8 Length=1462401 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 53192 TTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTAC 53251 || ||||| || || | || || |||||| |||| | || | | || || ||| Sbjct 1394928 TTGATGCGTGTGGCTGTCGGCATTCACGGTAACGATATCGACCGGGCCATCGAAACCTAC 1394987 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 | | ||| |||| ||||| || ||||| | || ||||| |||||||| || || Sbjct 1394988 CAACTTATGTCCCAACGCTACTTCACCCACGCGTCACCCACCCTCTTCAACGCCGGAACA 1395047 Query 53312 AATCACCCTCAGATGTCGAGCT---GCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368 ||| |||||| | |||| ||||||| || |||||||||||||| ||||| Sbjct 1395048 CCTCATCCTCAGCTC---AGCTCATGCTTCCTTGTATGTATGAAGGATGACTCCATCGAA 1395104 Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCC 53398 || |||||||| || |||||| | |||||| Sbjct 1395105 GGTATCTACGATACTCTCAAGAACTGTGCC 1395134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212525178400