Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 185 1e-41 seq4 167 3e-36 >seq1 Length=3319996 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| ||||| |||||||| || ||||| || || ||||| Sbjct 2719256 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACGATCACTCTCGAAGTCGAGTCTTCG 2719197 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || || |||||||||||||| ||||| || |||||| Sbjct 2719196 GACACGATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 2719137 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || |||||||||||||| | || ||||| | || || || Sbjct 2719136 CAGCGCCTTATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGATTACAAC 2719077 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| || ||| | |||||||||||||| Sbjct 2719076 ATCCAGAAGGAGTCTACTCTTCACCTTGTCCTCCGTCTTCGCGGTGG 2719030 Score = 165 bits (182), Expect = 9e-36 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| Sbjct 2719028 ATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACCATCACGCTTGAGGTCGAGTCGTCC 2718969 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || ||||||| || || || ||||||||||| || ||||| || ||| Sbjct 2718968 GATACCATCGACAACGTGAAGGCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAG 2718909 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| || ||||||| |||||| || | ||||| || Sbjct 2718908 CAGCGCCTGATCTTCGCGGGGAAGCAGCTGGAGGATGGTCGTACACTCTCCGACTACAAC 2718849 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || ||||| || || Sbjct 2718848 ATCCAGAAGGAGTCGACTCTCCACCT 2718823 Score = 150 bits (166), Expect = 2e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || || | ||||| ||||| Sbjct 2718750 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGTCTTCG 2718691 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || |||||||| |||||||| || || || |||||| Sbjct 2718690 GACACCATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAGGGTATCCCACCCGACCAG 2718631 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||||| || || || | |||||||| Sbjct 2718630 CAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTATAAC 2718571 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| ||| || ||||| Sbjct 2718570 ATCCAGAAGGAGAGCACGCTGCATCT 2718545 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || ||||| |||||||| || || || || ||||| ||||| || ||||||| || ||| Sbjct 2719379 ATCCCTCCCGACCAGCAACGCCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGGACC 2719320 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | ||||| || |||| ||||||||||| |||||||| ||| | || || || ||| Sbjct 2719319 CTGTCCGACTACAACATCCAGAAGGAATCCACCCTTCATCTCGTCCTCCGCCTCCGTGGT 2719260 Query 27631 GG 27632 || Sbjct 2719259 GG 2719258 Score = 91.5 bits (100), Expect = 2e-13 Identities = 81/99 (82%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 ||||| |||||||||||||| || || |||||||| ||||| |||||||||| ||||| Sbjct 391366 ATTCCCCCAGACCAGCAGCGCCTTATCTTTGCTGGCAAGCAGCTCGAGGATGGACGTACG 391425 Query 27571 CT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 || ||| ||||| || |||| ||||| || || ||||| Sbjct 391426 CTGAGC-GACTACAACATCCAGAAGGAGTCGACGCTTCA 391463 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || |||||||| ||||| Sbjct 391206 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 391265 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | ||| | ||||| ||||| |||||||||||||| Sbjct 391266 GACACCATCGACAATGTCAAGGCCAAAATCCAGGACAAGGAGGG 391309 >seq4 Length=1918071 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || ||||||||||| || || || || ||||| Sbjct 1158646 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCC 1158587 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || ||||||||||||||||| ||||| || |||||| Sbjct 1158586 GACACCATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1158527 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || || ||||| ||||| |||||||||| |||||||| | ||||| || Sbjct 1158526 CAACGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCTGACTACAAC 1158467 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || |||||||| || ||| | |||||||| || || Sbjct 1158466 ATTCAGAAGGAGTCGACTCTTCACCTCGTCCTCCGTCTTCGTGGCGG 1158420 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||||||||||||||||||||| || || |||||||| ||||| Sbjct 1158418 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAGACCATCACCCTTGAGGTAGAGTCGTCC 1158359 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || ||||||||||| || ||||| || || Sbjct 1158358 GACACCATCGACAACGTTAAGGCAAAGATCCAAGACAAGGAGGGTATCCCTCCCGATCAA 1158299 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| | || |||| || || | | ||||| || Sbjct 1158298 CAGCGTCTCATCTTTGCCGGAAAGCAGTTGGAAGATGGGCGCACGTTGTCCGACTACAAC 1158239 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || ||||| ||||| || | ||||| || |||||| Sbjct 1158238 ATCCAGAAGGAGTCGACTCTCCATCTTGTTCTCCGTCTCCGTGGTGGA 1158191 Score = 147 bits (162), Expect = 2e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||||| Sbjct 1157911 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACTATCACTCTTGAGGTCGAGTCTTCC 1157852 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| || || |||||||||||||| || || || |||||| Sbjct 1157851 GACACGATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 1157792 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||||||||| |||| || || || | ||||| || Sbjct 1157791 CAGCGCCTCATCTTCGCCGGAAAGCAACTCGAAGATGGACGCACGCTCTCCGACTACAAC 1157732 Query 27586 GTCCAAAAGGA 27596 | || ||||| Sbjct 1157731 ATTCAGAAGGA 1157721 Score = 140 bits (154), Expect = 4e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| ||||||||| | || || ||||| || || |||||||| || || Sbjct 1158191 AATGCAGATCTTCGTCAAGACGTTGACGGGAAAGACGATCACCCTTGAGGTCGAATCGTC 1158132 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | || | ||||| || ||||| |||||||| || ||||| || || || Sbjct 1158131 CGACACGATCGACAACGTAAAGGCGAAGATTCAAGACAAGGAAGGCATTCCCCCGGATCA 1158072 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || ||||||||||| |||||||| | || ||||| | || || || Sbjct 1158071 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGTCGGATTACAA 1158012 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || || || ||||| Sbjct 1158011 CATCCAGAAGGAGTCAACCCTCCATCT 1157985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306778528960