Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq4 104 1e-17 seq1 89.7 3e-13 >seq4 Length=1918071 Score = 104 bits (114), Expect = 1e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | |||||| || || || |||||||| |||||||| || || || Sbjct 1157685 CCGCCACGGAGACGAAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAG 1157744 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| ||||| || ||||| || || | ||||| ||||| ||||| Sbjct 1157745 AGCGTGCGTCCATCTTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 1157804 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || ||| | ||| ||||| ||| || Sbjct 1157805 ATACCCTCCTTGTCCTGGATC-TTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGAC 1157863 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | || || || || ||||| | || || || || ||||||||| Sbjct 1157864 CTCAAGAGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCATG 1157912 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | ||||||||| |||||| || ||||| || || || | || ||| Sbjct 1158201 AGACGGAGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTGCGC 1158260 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | || || |||||||| || | ||||||||| || || || | |||||| Sbjct 1158261 CCATCTTCCAACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGGAGGGATACCCTCC 1158320 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| |||| |||||| | || ||||| ||| || || | ||| Sbjct 1158321 TTGTCTTGGATC-TTTGCCTTAACGTTGTCGATGGTGTCGGACGACTCTACCTCAAGGGT 1158379 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | ||| || || || || ||||| Sbjct 1158380 GATGGTCTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 1158418 >seq1 Length=3319996 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | || ||||| |||||| || ||||| ||||| || Sbjct 2719030 CCACCGCGAAGACGGAGGACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAG 2719089 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || ||||| || |||||||| || | ||||| ||||| || || Sbjct 2719090 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGA 2719149 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| |||| || ||| | || ||||| ||| || Sbjct 2719150 ATGCCCTCCTTGTCCTGGATC-TTTGCCTTCACGTTGTCGATCGTGTCCGAAGACTCGAC 2719208 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || ||||| || || || | || || || || |||||||| Sbjct 2719209 TTCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2719256 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 34498 ACCAA-ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||| ||| || ||||||||||| || |||||||| || || || || || | || || Sbjct 2718541 ACCAAGATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTC 2718600 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 || || || || || || || | |||||| ||||| || || | |||||||| || | Sbjct 2718601 GAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATC-CT 2718659 Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 || || | || ||| | || ||||| |||||| |||| ||| || || | Sbjct 2718660 GAATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCT 2718719 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| | || || || || |||||||| Sbjct 2718720 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2718750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727651430364