Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq1 113 4e-20 >seq4 Length=1918071 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || ||||||||| | || || ||||| || || ||||| Sbjct 1158418 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAGACCATCACCCTTGAGGTAGAGTCGTCC 1158359 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| || |||||||| || || || || ||||||||| Sbjct 1158358 GACACCATCGACAACGTTAAGGCAAAGATCCAAGACAAGGAGGGTATCCCTCCCGATCAA 1158299 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 |||||| | || | ||||| || || |||||||| | || |||| ||||| ||||| Sbjct 1158298 CAGCGTCTCATCTTTGCCGGAAAGCAGTTGGAAGATGGG-CGCACGTTGTCCGACTACAA 1158240 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||||||||| | ||| | ||| | ||| | || ||||| || Sbjct 1158239 CATCCAGAAGGAGTCGACTCTCCATCTTGTTCTCCGTCTCCGTGGTGGAAT 1158189 Score = 123 bits (136), Expect = 2e-23 Identities = 154/210 (73%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| | || || ||||| || ||| ||||| Sbjct 1158190 ATGCAGATCTTCGTCAAGACGTTGACGGGAAAGACGATCACCCTTGAGGTCGAATCGTCC 1158131 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || ||||||||||| |||||||| || || ||||| Sbjct 1158130 GACACGATCGACAACGTAAAGGCGAAGATTCAAGACAAGGAAGGCATTCCCCCGGATCAG 1158071 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || | || ||| | ||| | || ||||||||| Sbjct 1158070 CAGCGTCTTATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGTCGGATTACAAC 1158011 Query 27168 ATTCAAAAGGAGTCGACCTTACAT-TTGGT 27196 || || |||||||| ||| | ||| ||||| Sbjct 1158010 ATCCAGAAGGAGTCAACCCTCCATCTTGGT 1157981 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||| |||||| |||| || || ||||| || | ||| Sbjct 1158646 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCC 1158587 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || ||||| || ||||| || Sbjct 1158586 GACACCATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1158527 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||| || | || || | ||| | || || |||||| Sbjct 1158526 CAACGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCTGACTACAAC 1158467 Query 27168 ATTCAAAAGGAGTCGAC 27184 ||||| ||||||||||| Sbjct 1158466 ATTCAGAAGGAGTCGAC 1158450 Score = 109 bits (120), Expect = 5e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || ||||| ||| |||| |||||||| || || | || Sbjct 1157912 CATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACTATCACTCTTGAGGTCGAGTCTTC 1157853 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| ||||||| | || || || || || ||||| || || || || ||||| || Sbjct 1157852 CGACACGATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCA 1157793 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | |||||| || ||| | ||||| | || | ||||| ||||| Sbjct 1157792 GCAGCGCCTCATCTTCGCCGGAAAGCAACTCGAAGATGGACGCACGCTCTCCGACTACAA 1157733 Query 27167 CATTCAAAAGGAG 27179 |||||| |||||| Sbjct 1157732 CATTCAGAAGGAG 1157720 >seq1 Length=3319996 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || ||||| ||||| || | || Sbjct 2719256 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACGATCACTCTCGAAGTCGAGTCTTCG 2719197 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || ||| || || ||||| || ||||| || ||||| || Sbjct 2719196 GACACGATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 2719137 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||||| ||| | || ||| | ||| | |||||||||||| Sbjct 2719136 CAGCGCCTTATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGATTACAAC 2719077 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || | || | ||| | || ||||| || Sbjct 2719076 ATCCAGAAGGAGTCTACTCTTCACCTTGTCCTCCGTCTTCGCGGTGGTAT 2719027 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||||||| | || || ||||| || || ||||| Sbjct 2719028 ATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACCATCACGCTTGAGGTCGAGTCGTCC 2718969 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || |||||||| || || || || || ||||| Sbjct 2718968 GATACCATCGACAACGTGAAGGCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAG 2718909 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || |||| || || || | ||||| |||||| Sbjct 2718908 CAGCGCCTGATCTTCGCGGGGAAGCAGCTGGAGGATGGTCGTACACTCTCCGACTACAAC 2718849 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 2718848 ATCCAGAAGGAGTCGAC 2718832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434915638268160