Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3 125 6e-24 >seq3 Length=2064430 Score = 125 bits (138), Expect = 6e-24 Identities = 170/234 (73%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 34265 GAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGG 34324 |||||||| |||||||| ||| || || ||| || ||||| ||| || | ||| Sbjct 738706 GAGGAGCTCCTGTGGTTTGTGCACGGCGCGACGGACTCCAAGCTGCTGTCCGACAAGGGC 738765 Query 34325 GTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTC--CCAT 34382 || ||||||||||||| ||||||| || || |||| ||||||||| | |||| Sbjct 738766 GTAAAGATCTGGGACGGGAACGGGTCGAAGGAGTTCTTGGAGAAGCGGGGGCTGGGCCAT 738825 Query 34383 C-TCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441 | ||| |||| || || | || ||||| |||||||||||||||||||||||||| || Sbjct 738826 CGTCGCGAGGGGG---ACCTAGGACCGGTATACGGGTTCCAGTGGAGACACTTTGGCGCA 738882 Query 34442 GAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAG 34495 |||| || |||| | |||| ||||| |||| | ||| |||||| || Sbjct 738883 AAGTACGAGGACTGCGACAAGAGCTATGCGGGAGAGGGCGTGGATCAGCTGAAG 738936 Score = 125 bits (138), Expect = 6e-24 Identities = 170/234 (73%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 6850 CTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCC 6909 || |||||| ||| | |||| ||||| |||| | |||| || |||| || || Sbjct 738936 CTTCAGCTGATCCACGCCCTCTCCCGCATAGCTCTTGTCGCAGTCCTCGTACTTTGCGCC 738877 Query 6910 AAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA-GATGG-- 6966 |||||||||||||||||||||||| ||||| || | || || |||| ||| ||||| Sbjct 738876 AAAGTGTCTCCACTGGAACCCGTATACCGGTCCTAGGT---CCCCCTCGCGACGATGGCC 738820 Query 6967 GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCG 7026 | ||||||||| |||| || || ||||||| ||||||||||||| || ||| Sbjct 738819 CAGCCCCCGCTTCTCCAAGAACTCCTTCGACCCGTTCCCGTCCCAGATCTTTACGCCCTT 738760 Query 7027 GGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTC 7080 | || ||| ||||| || ||| || || ||| |||||||| |||||||| Sbjct 738759 GTCGGACAGCAGCTTGGAGTCCGTCGCGCCGTGCACAAACCACAGGAGCTCCTC 738706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448259553533760