Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 seq1 95.1 1e-14 >seq4 Length=1918071 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||| ||||| || || || || || |||| || || ||| | || || Sbjct 1157702 CACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCATCTTC 1157761 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 || || || || || || || || ||||||||||||| || | | ||| |||||| Sbjct 1157762 GAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTG 1157821 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| ||| || | ||| | | | ||| ||| ||||| || || | |||||| | | Sbjct 1157822 GATCTTCGCCTTCA-CGTTGTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCT 1157880 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || || || || || ||||| ||||| Sbjct 1157881 TTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1157911 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 39076 ACCAA-ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| ||| || || ||| || || || || ||||| | || || || |||| || Sbjct 1157981 ACCAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTC 1158040 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| || || || || |||||||||||||| || | ||| | || || ||||| Sbjct 1158041 GAGCTGCTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTG 1158100 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || ||| || | ||| | | | ||| ||| ||| || || || | ||||| | | Sbjct 1158101 AATCTTCGCCTTTA-CGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCT 1158159 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||||||| ||| || || ||||| ||||| Sbjct 1158160 TTCCCGTCAACGTCTTGACGAAGATCTGCAT 1158190 >seq1 Length=3319996 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 39076 ACCAA-ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| ||| ||||||||||| || || || ||||| |||| || || || | || || Sbjct 2718541 ACCAAGATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTC 2718600 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || |||||||||||||||| || | | ||| || ||| Sbjct 2718601 GAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCCTG 2718660 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || ||| || | ||| | | | || || |||||||| |||| ||||| | | Sbjct 2718661 AATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCT 2718719 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || || || ||||| ||||| Sbjct 2718720 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2718750 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || ||||||| || || || |||| || || || ||||| ||||| Sbjct 2719065 CTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAA 2719124 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||| ||||||||||||| ||| | || ||| |||||| ||| || || | ||| Sbjct 2719125 GATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT-TGCCTTCACGT 2719183 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | ||| || ||||| || || | ||||| | || ||||| || || || | Sbjct 2719184 TGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTGA 2719243 Query 39272 CAAAGATTTGCAT 39284 | ||||| ||||| Sbjct 2719244 CGAAGATCTGCAT 2719256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429542940575804